Gene Pecwa_2470 details

Gene Information

• Locus tag: Pecwa_2470
• ID: 8530871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2677940
• End bp: 2678665
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 56%
• Product: ABC transporter related protein
• Protein accession: YP_003259838
• Protein GI: 261821732

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATT TTGCAGTACA GCTCGAAGAA CTAGCCCTCG GTTACAATGG AAATCCAGCA 
TTGAGCGCGG TCAGCGGTTC GGTAAACACT GGCTCCCTGA CGGCGGTAGT CGGACCAAAC 
GGTTCAGGTA AATCAACACT ACTGAAAGGG ATTGCCGGAA TACTACACCC CCTATCGGGC 
TTCTGCCGTA TCGCATCGGG TGCACGCATC GCTTATCTAC CACAGCTATC GGAACTGGAT 
CGTAGCTTTC CTGCCAGCGT CCACGATCTG GTCTCGCTGG GGCTCTGGCA GGATCGCGGT 
TTGCTACGCT GGCATCGCCG TGACGATCGA GTGCGTATAT CCCAAGCGCT TGCCGCCGTC 
GGACTGGCTG GGTTTGATAA TAAGCCACTC AGCGCCCTGT CGGGCGGGCA GTTTCAGCGT 
GCTCTGTTTG CACGGGTGAT CGTCCAGAAT GCCAGCATCA TTTTGCTCGA CGAGCCCTTT 
AATGCCATTG ATACAGCGAC CACACAAGAG ATGCTGGCGC TGATTAAAAG CTGGCACGCC 
CAACAACGTA CGGTCATCGT GGTGATCCAC GATCCTGAAC TGGTACTTCG CCATTTTCCT 
GAGACATTGA TGGTCAACGG CACGGTGGTC GCTTGGGGAG AAACCGACTG GGTGATGAAG 
CATAGCCTGC ACTCGCCCGT TTTCTGTCAG CATAATACCG CACGGTACGC GACAGGGGCT 
CGATAA 

 

Protein sequence

MTDFAVQLEE LALGYNGNPA LSAVSGSVNT GSLTAVVGPN GSGKSTLLKG IAGILHPLSG 
FCRIASGARI AYLPQLSELD RSFPASVHDL VSLGLWQDRG LLRWHRRDDR VRISQALAAV 
GLAGFDNKPL SALSGGQFQR ALFARVIVQN ASIILLDEPF NAIDTATTQE MLALIKSWHA 
QQRTVIVVIH DPELVLRHFP ETLMVNGTVV AWGETDWVMK HSLHSPVFCQ HNTARYATGA 
R