Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2467 |
Symbol | |
ID | 8530868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2674519 |
End bp | 2675013 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | type VI secretion lipoprotein, VC_A0113 family |
Protein accession | YP_003259835 |
Protein GI | 261821729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACAA TAATGCAACT GCGCTGCTGG CTGTTACCGC TACTAGCATT GCTACTGATT GCGTGCAGCA GCAGTCCCAC TCCGGTGGCG CGTTATAACT TGCACTTCCA GGCGCACCCG CAGATCAACA GCGGCGCACC GCTCAAGGTG CGGGTGATGT TATTGACTTC AGACGCGGAA TTCATGTCCG CCGACTTCTA CTCCCTGCAG AATCAGCCCG CAGATGCATT GGGTAGCACG TTGCTCAACA ACCAACAGTT TTTCCTGATG TCAGGTCAAC TGAGCAAAAT GCTTAACGCC AAAAGTCTGC CAGAAGCGCG CTACATTGGC ATCATGGCGG AGTATCAGGC GCTGGACGGC AAAGTCTGGC GGCTGGCGCT ACCGTTCCCA GATGGTGAGA ACAGCGCGTT TTGGGTGTTC TGGAAAAGTA ACGACGATGA GTTGAACGCC CACATGATGG CGGACATCAA CGGCCTTCGC GTGGTTAAGC AGTAA
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Protein sequence | MMTIMQLRCW LLPLLALLLI ACSSSPTPVA RYNLHFQAHP QINSGAPLKV RVMLLTSDAE FMSADFYSLQ NQPADALGST LLNNQQFFLM SGQLSKMLNA KSLPEARYIG IMAEYQALDG KVWRLALPFP DGENSAFWVF WKSNDDELNA HMMADINGLR VVKQ
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