Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2466 |
Symbol | |
ID | 8530867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2673169 |
End bp | 2674509 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | type VI secretion protein, VC_A0114 family |
Protein accession | YP_003259834 |
Protein GI | 261821728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAT CCGAAAAGGT GGTTTGGACC GAAGGGATGT TCCTGCGTCC TCACCATTTC CAGCAGTCGG AAAATTATCT TCACAGCACA CTACGTGATT GGGGCCAGTC GCAACGCGCT TATACCTGGG GATTCTTCGA TCTGGAGTTT GATGAAGCGC TGCTGCGTCA GGGAAAACTA GCGCTAAGTG CCGCCAGCGG TTGCCTGCCG GATGGCACGT TCTTTTCCTT CAGCCTGCCG CAACATGGAC CAGCACCGCT TGAACTGCCT GCCAATGTTG ATCGTGCTAA CGTGGTGCTG GCGATCCCAG CCCGCCGCAA TGGTCGAGAA GCGGTGGTGT TTCAGGAGAC ACAAGATTCT CTGGCTCGCT ATCTCGCTTG GGAAACCGAA GTGGAAGATG ACAACGCGCA GGCGATCGGC GCGGCTACAG TACAGTTCGG TAAACTGCGT TTGCGTCTGA TGCTGGAGCA AGATCTCACC GCAGAATGGA CGGCAATGGG CGTAGCGCAG GTGATTGAGA AGCGCAGCGG TAACCACCTG CGCCTTGATA CCGATTACAT CCCACCGATG CTGGCGCTCA ACGGCAGTCG GCCACTGCAA AGCATGCTTA ACGATCTGCA TGGTCTGATG CAGCAGCGCA GTCAGCAACT AAGCCAGCGT GCGCAAGGTA CTGGTCGCTT CAACAGTGCT GACATGGTCG ATTTTATGCT ACTGGCCATG CTGAATCGCC AACTCGGCCT GCATGCGCAT CTGCAACATT TGCCGCTATT GCATCCTGAA ACGCTCTACC GCTATTGGTT GCAACTGGCT GCTGAACTCT GTACCTGGAT GCCAGCACGC ACGCCTGAAC CCTTGCCGCT TTACAACCAC GATGACCTGC ACGGCTGTTT TACCCGTTTA ACGCTGCTGC TGCGTCAGGG GCTATCTCAG GTAATGGAAG AAAGTGCGAT TCAGCTTCCA CTCACCCAGC GCTCACACGG TCTTAACGTT GCCACGGTGC CGGAAAGCAG CATGGTACGC GAATTCGGCT TTGTGCTGGC AGTAAAAGCC AGTGTGCCTG CCGAAGCCCT GAAAACCCAC TTCCCAGCAC AAATGAAAGT CGCACCAGTT ACCAAAATCC GCGATCTGGT TCAACTGCAA CTACCCGGCC TGGTGTTGAA AGCCATGCCG GGTGCACCGC CGCAAATTCC ATGGCATGCC GGTTACAGCT ACTTCGAGCT GGATAAGAAC GGCGAGCTGT GGAAAGAGAT GGAACGCTCC GGTGCGTTTG CACTTCATCT AGCTGGTGAG TTTCCGGGCC TGGACATGGA GTTCTGGGCC ATTCGTAGTT CATCAGAATA A
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Protein sequence | MNRSEKVVWT EGMFLRPHHF QQSENYLHST LRDWGQSQRA YTWGFFDLEF DEALLRQGKL ALSAASGCLP DGTFFSFSLP QHGPAPLELP ANVDRANVVL AIPARRNGRE AVVFQETQDS LARYLAWETE VEDDNAQAIG AATVQFGKLR LRLMLEQDLT AEWTAMGVAQ VIEKRSGNHL RLDTDYIPPM LALNGSRPLQ SMLNDLHGLM QQRSQQLSQR AQGTGRFNSA DMVDFMLLAM LNRQLGLHAH LQHLPLLHPE TLYRYWLQLA AELCTWMPAR TPEPLPLYNH DDLHGCFTRL TLLLRQGLSQ VMEESAIQLP LTQRSHGLNV ATVPESSMVR EFGFVLAVKA SVPAEALKTH FPAQMKVAPV TKIRDLVQLQ LPGLVLKAMP GAPPQIPWHA GYSYFELDKN GELWKEMERS GAFALHLAGE FPGLDMEFWA IRSSSE
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