Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2463 |
Symbol | |
ID | 8530864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2667559 |
End bp | 2668266 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | type VI secretion-associated protein, BMA_A0400 family |
Protein accession | YP_003259831 |
Protein GI | 261821725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCATT ACGCTGCCCC CGGCTGGTAC GGAAAATTGC CCAGCTCGGG TGACTTTGTG AAGCGACGTT TTCCCGATGC GCTCTATCGG CAGTGGTCCA ACTGGTTTCA GGTCGGACTG CATCACTGGA AAACCAGTGA TGAGGGGGAT AACGCACCGT CGCGTGCCTT TCTCAACGCG CCAGTGTGGA ATTTTGTCGT ACCGCCGATG CTCGGTAGCC AGTTGATTCA GATGGGCTGC CTGATCGCCG CGTGCGACAG CGTCGGGCGC CACTACCCGC TGTGCGCACT GCGCCATTTC ACGCCAGCAG AGTGGTCGCC AGCGCTGCTG GCATGCTCCG GCGAGTGGTA TCAGCAGGTT GGTAACATGC TGTTGCGCGA AGTACGGAGC GGCGGCACGC CAGAACAACT GGATCAGGCG TTGCTTCGCA TCCCGCAGCC ACAGGGGCTT GGCGAACAGT CGGGTATTCT CGACGTGATT GATGCGGGTG ACTACCCGTC AACGCTGAAC TGGAAACGAC CGGGTGACAG TTTTGACCCA CAGTTCTACA CCAGTTTCTG GTGGACCAAT CAGAGCGACG GTTTCCCACT TTATACGCAG GTACATAGCG GCAATTTCAC CGCGCAGTTG TTTTCGTTGT TGTTCGACCC AGCCGGTGGA GCAAAACCCG GACGAAACGG ACTTTATCCA CCGATGTTTG AATCCTGA
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Protein sequence | MTHYAAPGWY GKLPSSGDFV KRRFPDALYR QWSNWFQVGL HHWKTSDEGD NAPSRAFLNA PVWNFVVPPM LGSQLIQMGC LIAACDSVGR HYPLCALRHF TPAEWSPALL ACSGEWYQQV GNMLLREVRS GGTPEQLDQA LLRIPQPQGL GEQSGILDVI DAGDYPSTLN WKRPGDSFDP QFYTSFWWTN QSDGFPLYTQ VHSGNFTAQL FSLLFDPAGG AKPGRNGLYP PMFES
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