| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2450 |
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| Symbol | |
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| ID | 8530851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2654269 |
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| End bp | 2655318 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_003259818 |
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| Protein GI | 261821712 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0218229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGT CGGCGCAAGT GATTGCGCTG CAGCGGGCTA CACGTCTACC GGATAATTTC
TGGCAGGGGG TGATGGCAGC ACCGTGGCGC TATGATCTCT TCCAGTTGCT GCGCAAGTTG
GATGCGCAGT GTGGGCAGGG TTATGCGTTG GGCCGTGCGC CATTGCCGAA ATTTGAAGCG
GTGCGGATTG GTCAAACGCC GTCGTTGGCT TTTGCACCCG CCGCGGTAGC GGAGGTGAGC
CGACGTGAGG AGGATGATCG CCATGAGATT TCCATTTATA GCTTCGGCTT GTTTGGCCCT
AATGGGCCAC TCCCTACGCA CCTGACCGAA TATGTACGCG AGCGTATCGT GCATCATCAG
GACCACAGTT TCGCCGCCTT TGCTGATCTA TTTCACCACC GCGCCACGTT GCTGTTTTAT
CGCGCCTGGG CCGATGCACA GCCCACGGTG TCTCTGGATC GCAGCGATGA CTGCCGGTTT
CTCAACTATC TGGCGTGTTT GTCCGGTATT GGATTACCCG CTCAGCAGCA GGCCACTTCA
CTGAGTTTGC ATGCGCGTCT GATGTTGGTC GGCCACCTCA GCCGTCACGG TCACGATGCT
GAAGGACTGG TGCGTATTTT GCGCCACTAC TTTGGCGTGC CGGTGCAGAT GGAACAGAAC
GTACCGCAAT GGTTGGCGCT GGATAAGCGC GATCGGGCGC GATTAGGGGC GGGCCGTCAG
ATGCCGCGCC TTGGCGCATC GTCATTTCTC GGTATTTCGG TGCGTGATGT GCAGCACCGT
TTTCGCCTAC GCTTTGGCCC GCTCAATATT GAACAGTATG CACACTTCCT GCCGGATGCG
CCGGGCGCAC GCGAAGTGCG TGACTGGGTG CGCCACTACC TCGGCATTGA AATGCAGTGG
GATCTCAGCC TGATTTTGGC GGCTGATGAC GTGCAGAGCG TGACGCTGAG CGGTAATGCT
CGGCTCGGTT ACACCAGTTG GCTGGGGCAA ATGCCACAGT TGCAGGATCG CGAGGATTTC
ATGTTTGAGG TTGAGGCAGC GGCACGCTAG
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| Protein sequence | MSESAQVIAL QRATRLPDNF WQGVMAAPWR YDLFQLLRKL DAQCGQGYAL GRAPLPKFEA
VRIGQTPSLA FAPAAVAEVS RREEDDRHEI SIYSFGLFGP NGPLPTHLTE YVRERIVHHQ
DHSFAAFADL FHHRATLLFY RAWADAQPTV SLDRSDDCRF LNYLACLSGI GLPAQQQATS
LSLHARLMLV GHLSRHGHDA EGLVRILRHY FGVPVQMEQN VPQWLALDKR DRARLGAGRQ
MPRLGASSFL GISVRDVQHR FRLRFGPLNI EQYAHFLPDA PGAREVRDWV RHYLGIEMQW
DLSLILAADD VQSVTLSGNA RLGYTSWLGQ MPQLQDREDF MFEVEAAAR
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