| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2449 |
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| Symbol | |
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| ID | 8530850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2651604 |
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| End bp | 2654213 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_003259817 |
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| Protein GI | 261821711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.258414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA TCAGCCGTGC CGTGTTATTC GGCAAGCTAG ATACGTTGTT ATTTACCTCG
CTGGAAAGCG CCACCGCCTT TTGTAAACTG CGCGGCAATC CCTATGTTGA ACTGGTGCAT
TGGCTGCATC AGTTGATGCA GCAACAAGAG GGTGACTTGC AGCGGGTCAT CAGCCATTTT
TCGCTGGATG AAAACGCACT GACGCGAGAT ATCGTTGCTG CCCTTGACCG CCTGCCACGT
GGAGCGAGTG CAGTCTCCGA CCTCGCTGAA CACATTGATA GTGCTGTGGA GCGCGCCTGG
GTTTACGCCT CGCTTAAGTA TGGTGCCACA CGGATCCGTG GTGGCCATCT ACTGATCGGC
ATGCTGAAAA CCTTCAATCT CGCCAACGTG CTGAAAGGCA TTTCCAGCCA GTTTGCCCAT
ATTAACGCCG ATGCGCTGTT GGAGCAGTTC GATACGGTAC TCGGCAGCAG CAAAGAAGCG
CAGCAGGCGC TAATCACACC GCCGGGCGTA GACGGTGCCG CCCCGATAGC CAGCGATAGC
ACGCTGGCAC AGTACGCACA GGATCTCACC GCGCGGGCGC GTGAAGGGCA TATTGATCCG
GTCACCGGAC GAGACGAAGA GATTCGCCAG ATGGTGGATA TTCTGATGCG TCGCCGCCAG
AACAATCCGC TGCTGACCGG TGAGGCTGGC GTCGGTAAAA CGGCGGTAGT AGAAGGACTG
GCGCTACGGA TTGCTACAGG CGCTGTGCCA GCACCGTTGC GCGATGTGCA GTTGTGGCTG
CTGGATATCG GCATACTACA AGCCGGTGCT GGGATGAAAG GTGAATTCGA AGCGCGTTTA
CAGGCACTAA TCAATGAAGT GCAGTCCAGT CCAACGCCCA TTGTGCTGTT TGTTGATGAG
ATCCACACGC TGGTCGGCGC GGGTGGACAG CAGGGCACGG GCGATGCCGC TAACCTGCTT
AAACCGGCGT TGGCGCGCGG TCAGTTACGC ACTATCGGCG CGACCACATG GGCTGAATAC
AAAAAATATA TCGAGAAAGA TCCTGCACTG ACACGCCGCT TCCAGACTGT ACAGATACAG
GAACCGGATG AAAACAAAGC GATTCTGATG TTGCGCGGTA CTGTTAGCGC ACTGGAAAAG
CATCATCAGG TGCTGCTGCT GGATGAAGCG GTCAGTGCGG CGGTGAAACT GTCGCATCGC
TATATTCCCG CACGGCAGTT GCCAGACAAA GCCGTTGCCC TGCTTGATAC CGCTTGCGCG
CGGGTGGCGG TAAGCCAGAG CGCGCAGCCT GCGGCACTGG AAGATTGTTT ACATCGCCTG
GATGCACTGG AAATTGAAGC AGAAATTACC TCGCGTGAAA CCAAAGTCGG CCTTGGTGAC
GCTGGGCGGC AGCAGGCGAT TGCCGCTCAG CGCACGGAAC TGGAAGCCGA ACGTGATGCG
TTGCAGCAGC GTTGGCAGAA GGAACGCGAG CTGGTTAATC AACTGATTGC GTTGTGTGGG
CGTTGCGTGG TGGAAGGTGA AGCGGCATTG CGTGACGAAT TGGGTATCGC TCGGCAGCGC
TTGCGCGAGA TACAGAGCGA AACACCGCTG CTGTTCGCGG CGGTTGATGC TGGCGTGGTT
GCGGCGGTTG TGTCTGACTG GACCGGCATT CCTCTGGGTC GCATGGTAAA GAACGAGATT
GATGCAGTAC TCAACCTTGC TGACACCCTG AATCAACGCG TGATTGGTCA GCGTCACGGC
CTGGATTTGA TCGCCAAACG TGTGCGCACC GCGCGCGCGC GCCTCGACAA CCCTAACAAA
CCGGTCGGCG TGTTTATGCT GTGCGGTCCG TCGGGTGTCG GCAAAACGGA AACGGCGTTG
GCTCTGGCGG AGTCACTGTA TGGTGGTGAG CAGAACGTCA TCACCATCAA CATGAGCGAA
TTTCAGGAAT CGCACACCGT TTCCACGTTG AAAGGCGCGC CTCCGGGCTA CGTGGGTTAC
GGCGAGGGGG GTGTGCTGAC CGAAGCCGTG CGTCGTCGTC CATACAGCGT AGTCTTGCTG
GATGAGATTG AGAAAGCGCA TCCAGACGTA CATGAACTTT TCTTTCAGGT GTTCGACAAA
GGCTGGATGG AGGATGGCGA AGGTCGGCAT ATCGATTTCC GTAACACCAT CATCATTCTA
ACCTCCAATG TCGGTACGCA GGTAATTAGT GCGTTGTGCG CCGATCCGGA ACTGATGCCT
GACCCAGATT CGCTCAGTGC CGCGCTGCGT AAACCGTTGT TGGAGGTGTT CCCGGCCGCG
CTGCTGGGGC GTTTATTGGT TGTGCCATAT TACCCGCTGA GCGATGCCAT GCTGGCGAAG
ATTGTGCAGT TACAACTGGC ACGCATTGTT CGCCGTTTGG CGGACAACCA CGGCATTGAG
ACTGAGATCG ATGCCTCCGT GGTACACCTG ATCGTACAGC GCTGCACCGA AGTTGAATCC
GGTGGCCGTA TGGTCGATGC CATCCTCACC AATACCCTGT TGCCGCAAAT GAGCCAGATG
TTGCTCAGCG CCCATGCCCG CGATGAACAC TATCGCCGTA TATATGTACG CTGTGAACAG
GGCGAATTTG TTTGCCAATT CGATATCTAA
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| Protein sequence | MSEISRAVLF GKLDTLLFTS LESATAFCKL RGNPYVELVH WLHQLMQQQE GDLQRVISHF
SLDENALTRD IVAALDRLPR GASAVSDLAE HIDSAVERAW VYASLKYGAT RIRGGHLLIG
MLKTFNLANV LKGISSQFAH INADALLEQF DTVLGSSKEA QQALITPPGV DGAAPIASDS
TLAQYAQDLT ARAREGHIDP VTGRDEEIRQ MVDILMRRRQ NNPLLTGEAG VGKTAVVEGL
ALRIATGAVP APLRDVQLWL LDIGILQAGA GMKGEFEARL QALINEVQSS PTPIVLFVDE
IHTLVGAGGQ QGTGDAANLL KPALARGQLR TIGATTWAEY KKYIEKDPAL TRRFQTVQIQ
EPDENKAILM LRGTVSALEK HHQVLLLDEA VSAAVKLSHR YIPARQLPDK AVALLDTACA
RVAVSQSAQP AALEDCLHRL DALEIEAEIT SRETKVGLGD AGRQQAIAAQ RTELEAERDA
LQQRWQKERE LVNQLIALCG RCVVEGEAAL RDELGIARQR LREIQSETPL LFAAVDAGVV
AAVVSDWTGI PLGRMVKNEI DAVLNLADTL NQRVIGQRHG LDLIAKRVRT ARARLDNPNK
PVGVFMLCGP SGVGKTETAL ALAESLYGGE QNVITINMSE FQESHTVSTL KGAPPGYVGY
GEGGVLTEAV RRRPYSVVLL DEIEKAHPDV HELFFQVFDK GWMEDGEGRH IDFRNTIIIL
TSNVGTQVIS ALCADPELMP DPDSLSAALR KPLLEVFPAA LLGRLLVVPY YPLSDAMLAK
IVQLQLARIV RRLADNHGIE TEIDASVVHL IVQRCTEVES GGRMVDAILT NTLLPQMSQM
LLSAHARDEH YRRIYVRCEQ GEFVCQFDI
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