| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2442 |
|---|
| Symbol | |
|---|
| ID | 8530843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2642478 |
|---|
| End bp | 2643548 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_003259810 |
|---|
| Protein GI | 261821704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGC TCAGCGCAGC AGAGTTGCAG CAGCGAATTA AACAAGGCGA AGTGATCAGC
GAATGGGTGC TGGATGGACT GGATTTACAC GGATGCGATC TTTCGGGCGG TGTTTTTCAG
GAAGTGTCGT TAATGGGGGC CAACTTACAG GGCGCAAATC TGAAGGAGTC GGTGTTTACC
GAATGTCAGT TTTCTCGGGC TAACCTATGC AACGCAAAGC TTGAGCAGAC GGTGTTTAAC
CAGTGTGAAA TGAAATCGTT AATCGTCAAC GACACCCGGT TAAACGAATC CGTTTTTAAC
CAGTGTGAAC TCACTGGCAG CGATTTCTCG CGTAGCGCGT TATTTACCAC GCAGTTTATG
CGCTGCCCCC TCACGCAGAG CCAGTTTGCA CAGGTTCAGC TTGATCGCAG CGTTTTTTTT
GAATCACCAC TGGATGACAG CCGATTTGAT GGTTGCAAAA GTTTTTTCAC TACCTTTTAC
GGTATTGATT TGCGCCAGAC CGCTTTGAAC GCGGGCGAAT TTGAACGCAC GGTATTTTTC
AATTGCGACC AGCGCGGTAA AAACTATACG CAACAGCGAT TTATCTGCTG TCAGTTTACT
GACTGTGCGT TGGATGAGGC GCAGTTTAAC GGTGCGCAAC TTTCACAGTG CAATTTCAAA
GGCGCTTCGC TAAAAGCCGC CCAACTGAAC CACGTCAATG CCAGCCAGGC GCTGTTTATG
GAGGCCGATC TCAGCGGTGC ACAGTGTAGG AGCGGCATAT TCGATCAGGC AATCTTTGTT
GGTGCAACGC TGGTGCGCAC TGATTTCAGT CAGAGTCGGC TTTTCCAGAG CATCCTGCAA
AAGGTGAACG CTTCGCAGGC GCTCTTCACC CTCAGCGATC TCACTTACAG TGACTTTTCT
GCGGCAGATT TACGCATGGC CGATCTGCGA GGTGCGACTT TTTCCCGCAC GCGTATGCAT
AGGGCACGTC AGGAGAACGC GCAATTCTCA GGTCGTCAGG GCATCCTTGA ATTTGATGAA
GAACTATTGG CAGCCGAGGC TTGGAGCGCA CAGCGCCAGA GCCGCAGTTG A
|
|---|
| Protein sequence | MTALSAAELQ QRIKQGEVIS EWVLDGLDLH GCDLSGGVFQ EVSLMGANLQ GANLKESVFT
ECQFSRANLC NAKLEQTVFN QCEMKSLIVN DTRLNESVFN QCELTGSDFS RSALFTTQFM
RCPLTQSQFA QVQLDRSVFF ESPLDDSRFD GCKSFFTTFY GIDLRQTALN AGEFERTVFF
NCDQRGKNYT QQRFICCQFT DCALDEAQFN GAQLSQCNFK GASLKAAQLN HVNASQALFM
EADLSGAQCR SGIFDQAIFV GATLVRTDFS QSRLFQSILQ KVNASQALFT LSDLTYSDFS
AADLRMADLR GATFSRTRMH RARQENAQFS GRQGILEFDE ELLAAEAWSA QRQSRS
|
|---|
| |