| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2329 |
|---|
| Symbol | |
|---|
| ID | 8530730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2525977 |
|---|
| End bp | 2526960 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_003259706 |
|---|
| Protein GI | 261821600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.702527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAT TCACTAAGGC GCTGGCTGCA ATCGGGTTAG CTGCTGTTAT GTCACAATCA
GCTATGGCAG AGAACTTAAA ACTGGGGTTT CTGGTTAAGC AGCCGGAAGA ACCCTGGTTC
CAGACCGAAT GGAAATTCGC CGATAAGGCA GGAAAAGATC TTGGTTTTGA TGTGATAAAA
ATTGCGGTGC CTGATGGGGA AAAAACCCTG AACGCGATTG ATAGTCTGGC GGCTAGCGGA
GCGAAAGGGT TTGTTATCTG TACCCCAGAT CCGAAATTGG GGCCGGCCAT TATTGCCAAG
GCGCGTAGCT ACAATCTTAA GGTGATTGCG GTTGACGACC AGTTCGTGAA TGCCAAAGGC
CAACCGATGG ACACGGTGCC GTTGGTGATG ATGGCAGCCA CCAAAATTGG CGAGCGTCAG
GGGCAGGAAC TGTATAAAGA GATGAACAAC CGTGGCTGGA AAGTGGATGA AACGGCGGTG
ATGGCGATTA CGGCTGATGA ATTGGACACC GCTCGTCGCC GTACTTCTGG CTCTATGGAT
GCGCTGAAAG TGGCTGGCTT CCCAGAAAAA CAGATCTATC GGGTGCCTAC CAAATCCAAC
GATATCCCCG GCGCGTTTGA CGCTGCTAAC TCTATGCTGG TTCAGCATCC TGGCGTGAAA
AACTGGCTGA TTATCGGTAT GAACGACAAC ACCGTGCTGG GTGGCGTTCG TGCGACGGAA
GGACAGGGCT TTAAAGCGGC TAACGTCATT GGTATCGGTA TCAACGGCGT GGATGCGGTG
AGCGAACTGT CCAAAGGTCA GGCAACGGGC TTCTTTGGCT CACTGCTGCC AAGTCCGGAT
ATTCACGGCT ATAAGAGTAT TCAGATGCTG AATGACTGGG TCACCAAAGG TGTCGAGCCG
GAGAAATTCA CCGAAGTGAC CGACGTGGTG CTGATCACTC GTGACAACTT TAAGGTCGAA
CTGGAGAAAA AAGGCCTGAT GTAA
|
|---|
| Protein sequence | MHKFTKALAA IGLAAVMSQS AMAENLKLGF LVKQPEEPWF QTEWKFADKA GKDLGFDVIK
IAVPDGEKTL NAIDSLAASG AKGFVICTPD PKLGPAIIAK ARSYNLKVIA VDDQFVNAKG
QPMDTVPLVM MAATKIGERQ GQELYKEMNN RGWKVDETAV MAITADELDT ARRRTSGSMD
ALKVAGFPEK QIYRVPTKSN DIPGAFDAAN SMLVQHPGVK NWLIIGMNDN TVLGGVRATE
GQGFKAANVI GIGINGVDAV SELSKGQATG FFGSLLPSPD IHGYKSIQML NDWVTKGVEP
EKFTEVTDVV LITRDNFKVE LEKKGLM
|
|---|
| |