| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2322 |
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| Symbol | rnfD |
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| ID | 8530723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2517246 |
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| End bp | 2518301 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_003259699 |
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| Protein GI | 261821593 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTA GAATTGCGAG TTCACCGTTC ACACATAACC AGCAGCGCAC ACAGCGCATC
ATGCTGTTGG TTATTCTAGC CTGCCTGCCG GGCATGCTGG CGCAGGTCTA TTTCTTTGGC
TACGGCAACC TGATTCAGGT CGGGCTGGCA TCGGCCACCG CGCTTATTGC AGAGGGCGTG
ACACTGTCAC TGAGGAAATT TGCAGTACGC ACCACACTGG CTGATAATTC CGCGTTACTG
ACCGCCGTGC TGCTCGGGAT CAGCCTGCCG CCGCTTGCCC CGTGGTGGAT GGTGGTGATG
GCAACCGTTT TTGCCATCAT TATCGCCAAA CAGCTATATG GCGGATTAGG ACAAAACCCT
TTTAATCCCG CGATGATTGG CTATGTGGTG CTGCTGATCT CTTTCCCGGT CCAGATGACG
AGCTGGCTGC CTCCTGCACC GCTGCAAACC ATCCCGCTCA GTTTCCATGA TGCGTTCATC
ATCATCTTTA CCGGGCATAC ACCTGACGGG CACACCATGC AGCAGTTGAT GCACAACGTT
GATGGCGTGA GCCAGGCCAC CCCGCTGGAT ACGTTTAAAA CCAGCCTGCG CTCCGGTCAA
ACGCCGCAGA ACATTCTGCA ACAGCCAATG TTTGCTCAAT CACTGTCCGG CATTGGCTGG
CAGTGGGTGA ATATCGGTTT TCTCATCGGC GGGCTGTTCT TGCTGATGCG CGGTACCATT
CGCTGGCATA TTCCGGTCAG TTTTCTTCTG TCGCTGATGT TTTGCGCCTC ACTAAGCTGG
TTTATTGCGC CGGAGAAATT TGCACCGCCG ATGTTACATC TGTTATCCGG CGCTACCATG
CTCGGTGCGT TTTTCATCGC CACCGATCCC GTTACAGCCT CAACGACGAA CCGTGGCCGT
CTGATTTTCG GAGCGTTGAT TGGATTATTG GTATGGCTAA TTCGCACCTA CGGCGGCTAC
CCGGACGGCA TCGCCTTTGC CGTTCTACTG GCGAACATTA CCGTACCGCT GATCGACTAT
TACACTAAGC CACGCGCTTA CGGCCACCAT CGCTGA
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| Protein sequence | MAFRIASSPF THNQQRTQRI MLLVILACLP GMLAQVYFFG YGNLIQVGLA SATALIAEGV
TLSLRKFAVR TTLADNSALL TAVLLGISLP PLAPWWMVVM ATVFAIIIAK QLYGGLGQNP
FNPAMIGYVV LLISFPVQMT SWLPPAPLQT IPLSFHDAFI IIFTGHTPDG HTMQQLMHNV
DGVSQATPLD TFKTSLRSGQ TPQNILQQPM FAQSLSGIGW QWVNIGFLIG GLFLLMRGTI
RWHIPVSFLL SLMFCASLSW FIAPEKFAPP MLHLLSGATM LGAFFIATDP VTASTTNRGR
LIFGALIGLL VWLIRTYGGY PDGIAFAVLL ANITVPLIDY YTKPRAYGHH R
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