| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2318 |
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| Symbol | tppB |
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| ID | 8530719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2513091 |
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| End bp | 2514611 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | putative tripeptide transporter permease |
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| Protein accession | YP_003259695 |
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| Protein GI | 261821589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAACAG CAAACAACAA CAGCGAATCA ACCGAAAGCA TCAGCATGAA CGCTTTCAAA
CAACCAAAAG CGTTTTATCT CATCTTTAGC ATCGAGCTGT GGGAGCGTTT TGGTTACTAC
GGTCTGCAGG GCATTATGGC GGTTTATCTG GTCAAAATGC TGGGCATGTC CGAAACCGAC
TCCATCACCC TATTTTCCTC GTTCAGCGCG TTGGTATACG GTTTCGTCGC CATTGGCGGC
TGGTTGGGCG ACAAAGTCCT CGGCACCAAA CGTGTCATCG TGTTAGGAGC CATCGTACTG
GCATTCGGCT ACGCCATGAT TTCCTACTCG GGTCATAGCG TGACATGGGT CTATATCGGT
ATGGCAACCA TTGCCGTCGG TAACGGGTTG TTTAAGGCTA ATCCGTCAGC TCTGCTGTCT
ACCTGCTACG CGAAAGACGA TCCGCGTCTG GATGGTGCCT TCACCATGTA CTACATGGCG
GTGAACATCG GCTCTTTCTT TTCTATGTTG GCTACACCGG TGCTCGCCGC AAACTATGGC
TGGAGCGTTG CGTTCTCCCT AAGCGTAGTC GGGATGATTC TAACGCTGGT TAACTTCATG
TTCTGCCGTA AGTGGGTTAG CACACAAGGT TCTCAGCCAG ATTTCCAGCC GATCAATTTG
CAGAAGCTCG CCATCACCCT CGTGGGTATC GTTGCACTGG TCGCGCTCTC CACTTGGCTA
TTGCACAATC AGAGCGTAGC TCGTTGGATA CTGACGCTTA TTTCAATCGC CGTTGTCGCC
ATTTTCATCA AGGAGATGCT GGCGGTGAAA GGTGCAGAAC GCAGGAAGAT GATCGTAGCA
CTTCTGCTGA TGCTGGAAGC CGTGGTCTTC TTTGTGCTGT ACAACCAGAT GCCAACATCG
CTGAACTTCT TTGCTATCCG CAACGTTGAG CACTCAATTT TAGGCTTTGC CTTTGAGCCA
GAGCAGTATC AAGCGCTCAA CCCATTCTGG ATCATGGTTG CCAGCCCGAT TCTGGCGGCG
GTTTACAACA AAATGGGCGA CCAACTGCCG ATGGCACACA AATTTGCGAT TGGTATGGTG
CTGTGCTCCG GCGCGTTTCT GGTGCTGCCG TGGGGCGCTA GCATGGCAAA CGAACAAGGT
ATCGTGTCCG TCAACTGGCT GATCCTCTGC TATGGCCTGC AAAGTATCGG GGAGTTAATG
ATTTCCGGGC TAGGTCTGGC GATGGTCGCT CAATTGGTGC CACAGCGTCT GATGGGCTTC
ATCATGGGTG CCTGGTTCCT GACGTCAGCC GGTGCCGCAA TTATTGCAGG CTACGTCGCC
AACATGATGG CCGTGCCTGA GAACGTCGTA GATCCGCACA CCTCTCTTGA GATTTATAGC
AATGTATTCA TGCAGATTGG CATAGTAACG GGCATCATCG CCGTTCTGAT GCTGTTGACC
GCACCGAAAC TGACGCGCAT GACTCAGGAT GTCATCGACA CTCCTGTGAA TACCGCCGCT
ACTAGCGCAG AATCGGTCTG A
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| Protein sequence | MSTANNNSES TESISMNAFK QPKAFYLIFS IELWERFGYY GLQGIMAVYL VKMLGMSETD
SITLFSSFSA LVYGFVAIGG WLGDKVLGTK RVIVLGAIVL AFGYAMISYS GHSVTWVYIG
MATIAVGNGL FKANPSALLS TCYAKDDPRL DGAFTMYYMA VNIGSFFSML ATPVLAANYG
WSVAFSLSVV GMILTLVNFM FCRKWVSTQG SQPDFQPINL QKLAITLVGI VALVALSTWL
LHNQSVARWI LTLISIAVVA IFIKEMLAVK GAERRKMIVA LLLMLEAVVF FVLYNQMPTS
LNFFAIRNVE HSILGFAFEP EQYQALNPFW IMVASPILAA VYNKMGDQLP MAHKFAIGMV
LCSGAFLVLP WGASMANEQG IVSVNWLILC YGLQSIGELM ISGLGLAMVA QLVPQRLMGF
IMGAWFLTSA GAAIIAGYVA NMMAVPENVV DPHTSLEIYS NVFMQIGIVT GIIAVLMLLT
APKLTRMTQD VIDTPVNTAA TSAESV
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