| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2316 |
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| Symbol | |
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| ID | 8530717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2508961 |
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| End bp | 2511561 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003259693 |
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| Protein GI | 261821587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.105291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAG CTCTCGTTAT CGTCGAGTCC CCGGCAAAAG CCAAAACGAT CAATAAGTAT
TTAGGCAATG ACTACGTGGT GAAATCCAGC GTCGGTCATG TACGCGATTT GCCGACAAGT
GGCTCAGCCA GTAAAAAGAG CGCGGACTCA ACGACTAAAG ATAAAACGAA AAAGAAAGTC
AAAAAGGATG AAAAATCCGC GCTAGTTAAT CGTATGGGCG TCGATCCTTA TCATGGCTGG
AAAGCTAACT ACGAAATCCT GCCGGGTAAG GAGAAGGTTG TTTCCGAACT AAAAACGCTG
GCGGAAAATG CTGACCACAT CTATCTCGCA ACCGACCTTG ACCGCGAAGG GGAAGCCATT
GCCTGGCACC TGCGGGAAAT TATTGGTGGT GACGATCGGC GTTTCAGTCG CGTAGTGTTT
AACGAAATCA CGAAAAATGC CATTACACAG GCGTTTGAAA AACCAGACAC GTTGAATATT
GACCGCGTTA ATGCACAGCA GGCGCGTCGG TTTATGGATC GCGTGGTGGG TTACATGGTT
TCCCCGCTGC TGTGGAAAAA GATTGCGCGT GGCCTGTCTG CCGGGCGTGT GCAGTCGGTT
GCAGTGCGCC TGATTGTCGA TCGTGAGCGC GAAATTAAAG CGTTCGTGCC GGAAGAATAT
TGGGAATTGC ACGCCGACTT ATTGGCGGGC AGTGATATTC AACTGCAAAT GCAGGTAACG
CATCACAACG GCAAACCGTT TAAGCCCGTT AACAAAGCTC AAACGCATGC GGCGGTCAGC
CTGCTTGAGA ATGCACGCTA TATCGTTGCT GACCGCGAAG ATAAGCCGAC TAGCAGCAAA
CCCGGTGCGC CGTTCATTAC GTCAACGTTG CAACAGGCTG CCAGTACACG TCTTGGTTTT
GGTGTGAAAA AGACCATGAT GATGGCGCAG CGTCTGTACG AAGCGGGCTA CATTACCTAT
ATGCGTACCG ACTCCACGAA CCTCAGTCAG GATGCGTTGA CGATGGTGCG TGGCTATATC
GGCGAAGAAT TCGGCAAGCG CTATCTGCCG GAGGCGGCAA TCGCCTACAG CAGCAAAGAA
AATTCACAGG AAGCGCACGA AGCCATTCGA CCTTCCGATG TAGGTGTGCT GGCTGACAGC
CTGAAGGATA TGGAAGCCGA TGCGCAGAAG CTGTATCAGT TGATCTGGCG TCAGTTCGTC
GCCTGTCAAA TGACGCCAGC GCAATACGAC TCCACCACGC TAATCGTGGA AGCCGCAGAT
TATCAACTGC GTGCAAAAGG CCGAACGCTG CGTTTTGATG GCTGGACGAA AGTCATGCCA
GCGCTGCGTA AGAATGATGA AGATCGCACG TTGCCGACCG TGGCCGTAGG TGAAGCATTA
TCACTACAGA AACTGCTGCC AGGGCAACAC TTCACCAAAC CACCGGCACG TTACAGCGAT
GCATCGCTGG TTAAAGAGCT GGAAAAACGC GGTATTGGTC GTCCTTCTAC CTACGCCTCG
ATTATTTCAA CCATCCAGGA TCGTGGCTAT GTCCGGGTGG AAAACCGCCG TTTCTACGCC
GAGAAGATGG GTGAAATTGT TACCGATCGG CTGGAAGAAA ACTTCCGCGA ATTGATGAAT
TACGATTTCA CCGCGCGGAT GGAAAGCCGT CTCGATCAGG TCGCCAATAA TCAGGCTGAA
TGGAAAGCTG TACTGGATGA GTTCTTCAAT GAATTTAGCC AGCAGTTGGA AAAGGCAGAA
CAGGACCCTG AAGAAGGCGG CATGCGGCCC AATGCGATGG TGTTGACCAG CATTGACTGC
CCGACCTGCT CTCGTCAAAT GGGTATTCGT ACTGCCAGTA CTGGGGTGTT TCTGGGTTGT
TCCGGCTATG CACTGTCGCC GAAAGAGCGC TGTAAAACCA CGATCAATCT GATACCCGAA
ACTGAAGTGC TGAATGTGTT AGAAGGCGAT GAAGCCGAAA CTAACGCACT GCGTGCTCGT
CGTCGCTGTG AAAAATGTGG TACGGCGATG GACAGCTACC TGATTGATAA CCAGCGTAAA
CTGCACGTTT GCGGGAATAA CCCAGCTTGT GATGGGTATG AGATCGAAAC GGGCGAGTTC
CGTATCAAGG GCTATGATGG GCCGATCGTT GAGTGTGAGA AATGTGGTTC CGAAATGCAT
CTCAAAATGG GACGCTTCGG TAAATACATG TCATGCACCG GCGAAACGTG CAGTAACACG
CGTAAGATCT TGCGTAATGG CGATGTTGCG CCACCGAAAG AAGATCCGGT GCCGTTGCCT
GAGTTGAGCT GTGAGAAGTC TGATGCGTAT TTCGTATTGC GCGACGGCGC TGCGGGAGTA
TTCCTCGCGG CCAATACGTT CCCGAAATCT CGTGAAACGC GGGCACCACT GGTAGAGGAA
CTGGTGCGAT TTAAAGATCG CTTGCCGGAG AAACTGCGCT ATTTGGCCGA TGCCCCGGAG
GTCGATAAAG ACGGCAATAA AACGCAGGTG CGTTTCAGCC GTAAGACCAA ACAGCAATAT
GTCTCGTCAG AGAAAGACGG CAAGGCAACG GGCTGGTCGG CGTTTTATAT TGACGGAAAA
TGGGTTGAAG GGAAGAAGTA A
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| Protein sequence | MGKALVIVES PAKAKTINKY LGNDYVVKSS VGHVRDLPTS GSASKKSADS TTKDKTKKKV
KKDEKSALVN RMGVDPYHGW KANYEILPGK EKVVSELKTL AENADHIYLA TDLDREGEAI
AWHLREIIGG DDRRFSRVVF NEITKNAITQ AFEKPDTLNI DRVNAQQARR FMDRVVGYMV
SPLLWKKIAR GLSAGRVQSV AVRLIVDRER EIKAFVPEEY WELHADLLAG SDIQLQMQVT
HHNGKPFKPV NKAQTHAAVS LLENARYIVA DREDKPTSSK PGAPFITSTL QQAASTRLGF
GVKKTMMMAQ RLYEAGYITY MRTDSTNLSQ DALTMVRGYI GEEFGKRYLP EAAIAYSSKE
NSQEAHEAIR PSDVGVLADS LKDMEADAQK LYQLIWRQFV ACQMTPAQYD STTLIVEAAD
YQLRAKGRTL RFDGWTKVMP ALRKNDEDRT LPTVAVGEAL SLQKLLPGQH FTKPPARYSD
ASLVKELEKR GIGRPSTYAS IISTIQDRGY VRVENRRFYA EKMGEIVTDR LEENFRELMN
YDFTARMESR LDQVANNQAE WKAVLDEFFN EFSQQLEKAE QDPEEGGMRP NAMVLTSIDC
PTCSRQMGIR TASTGVFLGC SGYALSPKER CKTTINLIPE TEVLNVLEGD EAETNALRAR
RRCEKCGTAM DSYLIDNQRK LHVCGNNPAC DGYEIETGEF RIKGYDGPIV ECEKCGSEMH
LKMGRFGKYM SCTGETCSNT RKILRNGDVA PPKEDPVPLP ELSCEKSDAY FVLRDGAAGV
FLAANTFPKS RETRAPLVEE LVRFKDRLPE KLRYLADAPE VDKDGNKTQV RFSRKTKQQY
VSSEKDGKAT GWSAFYIDGK WVEGKK
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