Gene Pecwa_2313 details

Gene Information

• Locus tag: Pecwa_2313
• ID: 8530714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2506144
• End bp: 2506905
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 53%
• Product: short chain dehydrogenase
• Protein accession: YP_003259690
• Protein GI: 261821584

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.119343
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATTACC AGCCTAAAAT CGATTTACTG CAAAACCGCA TCATTCTGGT CACTGGTGCC 
GGAGATGGCA TTGGCCGGGA AGCGGCGATG ACCTACGCCC GTTACGGCGC TCACGTCATC 
TTATTAGGGC GGACGGAAAG TAAACTACAG GCGGTTAAGC AGCAGATCGA ACAGGAACAT 
CGTGCGACAG CACACGTTAT TGTCTGCGAT ATGTTGGCCT TATCCTCTGC ACAGTGCTTT 
CAGTTGGCGG ATGAACTGGC ACAGGTTGTA CCGCATCTGG ATGGCGTACT CCACAACGCC 
GGATTGCTTG GAGAAGTTGC CCCTGTTGTA CAGCAAACGC CTGAGATCTG GCATCAGGTT 
ATGCAGGTTA ACATCAACGC GACCTTTATG TTGACGCAAG CGCTGCTACC CCTGCTATTG 
AAATCACCCT GCTCTTCTCT GGTTTTCACC AGTTCCAGCG TCGGTCGCGA AGGTCGCGCC 
AACTGGGGAG CCTATTCCGT ATCCAAGTTC GCCACAGAAG GTTTGATGCA GGTACTGGCA 
GAAGAATATC GCTCACAAAA TCTACGAGTG AACTGTATTA ATCCCGGTGG TACGCGGACG 
GGAATGCGCG CAGCCGCTTT CCCCAACGAA GATCCAATGA AGCTGAAAAC GCCGACAGAT 
ATCATGCCGC TGTATCTTTA CCTGATGGGT GACGACAGCC GCCGCAAGAC GGGGATGAGT 
TTTGATGCAC AGCCGGGTAG AAAAGCAGGT CCAGCCGAAT AA 

 

Protein sequence

MHYQPKIDLL QNRIILVTGA GDGIGREAAM TYARYGAHVI LLGRTESKLQ AVKQQIEQEH 
RATAHVIVCD MLALSSAQCF QLADELAQVV PHLDGVLHNA GLLGEVAPVV QQTPEIWHQV 
MQVNINATFM LTQALLPLLL KSPCSSLVFT SSSVGREGRA NWGAYSVSKF ATEGLMQVLA 
EEYRSQNLRV NCINPGGTRT GMRAAAFPNE DPMKLKTPTD IMPLYLYLMG DDSRRKTGMS 
FDAQPGRKAG PAE