| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2302 |
|---|
| Symbol | |
|---|
| ID | 8530703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2493266 |
|---|
| End bp | 2494456 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_003259679 |
|---|
| Protein GI | 261821573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAC TCAACCCTTA CTTCGGTGAA TTCGGTGGAC AGTTTGTTCC GCAGATCCTC
ATCCCGGCAT TACGCCAGTT AGAAGAGGCT TTCGTCAGCG CACAAAAAGA TCCTGAATTT
CAGGCCGAGT TTACCGATCT GCTGAAAAAC TATGCGGGTC GTCCAACAGC GCTAACCCTG
TGTCAAAACC TGACAGCCGG AACGAAAACC AAGCTGTACC TGAAGCGTGA AGATTTGCTG
CACGGCGGCG CGCACAAAAC GAATCAAGTA CTTGGGCAAG CCTTGCTGGC TAAACGCATG
GGTAAAAGCG AAATCATCGC GGAAACCGGC GCGGGACAAC ACGGTGTCGC GACAGCGCTG
GCTTGCGCCC TGCTTGGCCT GAAATGCCGC GTTTATATGG GTGCAAAAGA CGTCGAGCGC
CAGTCGCCGA ACGTTTTCCG TATGCGTCTG ATGGGAGCCG AAGTGATTCC GGTTCATAGC
GGTTCTTCCA CGCTGAAAGA TGCCTGTAAC GAAGCGCTGC GTGACTGGTC CGGCAGCTAT
GAAACAGCAC ACTATCTGCT GGGAACGGCG GCAGGCCCGC ACCCTTATCC AACGATCGTG
CGCGAATTCC AACGCATGAT TGGCGAAGAA ACGAAAGCGC AAATCCTGGA AAAAGAAGGT
CGCCTACCGG ATGCGGTACT GGCCTGCGTC GGCGGCGGCT CTAACGCGAT TGGGATGTTC
GCTGATTTCA TCGACGATAC TGACGTCCGT CTGATCGGCA TTGAACCTGG CGGCTTAGGC
ATTGAATCCG GGCAGCACGG TGCACCGTTA AAACATGGCC GCGTTGGTAT CTATTTCGGC
ATGAAGTCCC CGATGATGCA AACGTCTGAC GGACAAATTG AAGAGTCCTA CTCTATTTCC
GCCGGGCTGG ATTTCCCGTC CGTCGGCCCG CAGCACGCCT ACCTGAACAG CATCGGTCGT
GCCGACTATG TCTCGATTAC CGATGATGAA GCGCTGGATG CCTTCAAAGC GCTCTGTCGC
GGTGAAGGCA TTATTCCTGC GCTGGAGTCC TCCCACGCCC TGGCACACGC CTTGAAGATG
ATCAAAGCAG AGCCGGAGAA AGAGCAACTG CTGGTGGTCA ATCTGTCAGG CCGTGGTGAT
AAAGACATCT TTACCGTGCA TGATATTTTG AAAGATCGGG GAGAAATTTA A
|
|---|
| Protein sequence | MTLLNPYFGE FGGQFVPQIL IPALRQLEEA FVSAQKDPEF QAEFTDLLKN YAGRPTALTL
CQNLTAGTKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKSEIIAETG AGQHGVATAL
ACALLGLKCR VYMGAKDVER QSPNVFRMRL MGAEVIPVHS GSSTLKDACN EALRDWSGSY
ETAHYLLGTA AGPHPYPTIV REFQRMIGEE TKAQILEKEG RLPDAVLACV GGGSNAIGMF
ADFIDDTDVR LIGIEPGGLG IESGQHGAPL KHGRVGIYFG MKSPMMQTSD GQIEESYSIS
AGLDFPSVGP QHAYLNSIGR ADYVSITDDE ALDAFKALCR GEGIIPALES SHALAHALKM
IKAEPEKEQL LVVNLSGRGD KDIFTVHDIL KDRGEI
|
|---|
| |