Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2268 |
Symbol | |
ID | 8530668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2456963 |
End bp | 2458888 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | DNA topoisomerase III |
Protein accession | YP_003259645 |
Protein GI | 261821539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTTT TTATTGCCGA AAAGCCCAGT CTTGCACGGG CTATTGCAGA CGTGTTACCC AAACCGCATC GGCGCGGCGA TGGCTTTATT GCCTGTGGTC AAAATGATGT CGTGACGTGG TGCGTAGGGC ATCTGCTGGA GCAGGCGCAG CCGGATGTTT ATGATGCGCG CTATGCTCGT TGGTCTCTCG CCGACTTGCC TATCATTCCC CAAAAATGGC TGTTACAACC GCGGCCCTCG GTCAGCAAAC AGTTGAGTGC CATAAAAAAA CTCCTAAATG ATGCCAGCGA AGTGATTCAT GCAGGAGACC CCGATCGTGA AGGACAACTG TTGGTCGATG AAGTCCTGGA ATATCTTTCT CTGTCGGAAG AGAAGCGTCA GCAGGTACGT CGTTGTCTGA TCAACGATCT CAACCCACAG GCTGTAGAGC GTGCCGTTTC CCGTTTGCGT GAGAACAGAG AGTTCATCCC CCTGTGCGTC TCAGCATTAG CGCGTTCCCG TGCAGATTGG CTCTATGGCA TAAATATGAC CCGCGCTTAT ACGATATTAG GGCGCAATGC GGGTTATGAC GGCGTATTGT CGGTTGGCCG CGTGCAAACA CCGGTGCTGG GGCTGGTGGT GCGGCGAGAT GAAGAGATAG AAAACTTCGT TTCCAAAGAC TATTTTGAAG TTAAAGCCCA TATCGTGACG CCAGCCGATG AGCGTTTTGT CGCTATCTGG CAACCCAGTG AGTCGTGCGA GCCTTATCAG GATGAAGAAG GGCGATTGCT GCATCGATCT TTGGCGGATC ATGTTGTCAA ACGTATCGAA GGCCAGCCCG CATTCGTCAC CAGCTATAAT GACAAACGGG AGTCAGAAAT TGCGCCGCTG CCTTATTCAC TCTCAACGCT CCAGATTGAA GCGGCGAAGC GTTTTGGACT GAGCGCGCAG CAGGTACTGG ACGTATGTCA GAAATTGTAT GAAACCCATA AGCTGATCAC GTATCCGCGT TCTGACAGTC GCTATCTGCC AGAAGAGCAC TTTGCCGGGC GTCATGCTGT CTTGAATGCA ATATCTGTGC ATCAGCCCGA CCTGTTGCCA CAACCGGTTA TGGATGTCGA TCGGCGTAAC CGCTGCTGGG ACGATGGTAA GGTCGATGCT CACCACGCGA TTATTCCCAC CGCACGTAGT GCCAGTGCGT CGCTGACGGA GAATGAACGC AAGGTGTATG GGTTAGTCGC GCGGCAGTAC ATCATGCAGT TCTGCCCGGA CGCTGTGTTT CGCAAATGTG TCATTGAATT GGATATTGCG GGTGGCAAAT TTATTGCCAA AGCACGGTTT CTCGCCGAGG CGGGTTGGCG TACCTTGTTG GGTGGCAAAG AGCGGGACGA AGAAAACGAA GGTATGCCGT TACCCGTGGT GGCAAAGGGC GATGAATTGC TGTGTGAACG TGGCGAGGTC GTTGAGCGTC AAACTCAACC GCCGCGGCCT TTTACCGATG CGACGTTGTT ATCGGCGATG ACGGGTATCG CGCGCTTTGT GCAGGATAAG GAACTGAAGA AAATCCTGCG GGCGACCGAT GGTTTAGGCA CAGAGGCGAC GCGTGCGGGG ATTATCGAAT TACTGTTTAA GCGGACATTT CTGTTTAAGA AAGCTCGATA TATTCACGCG AGTGAAGCAG GGCGAGCATT AATTCACTCA CTGCCTGACA GTGCGGCGCA CCCTGATATG ACTGCACATT GGGAAGCCAC GTTGACGCAG ATTAGCGAGA AGAAATGCCG CTATCAGGAT TTTATGCAAC CGTTGACGAA CTCCTTGCAG GAGTTGATTC AGCAAGCGAA ACAAAATGGC GCGGTGAGAG CGTTCAAAGG GCTTTCTGCG CCGCCGTCGG GGGCCTCAAA ACGGCGCAAA CCTCAGGCTA AAAAAGCGAA GGAGCAGAAG CAATGA
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Protein sequence | MRLFIAEKPS LARAIADVLP KPHRRGDGFI ACGQNDVVTW CVGHLLEQAQ PDVYDARYAR WSLADLPIIP QKWLLQPRPS VSKQLSAIKK LLNDASEVIH AGDPDREGQL LVDEVLEYLS LSEEKRQQVR RCLINDLNPQ AVERAVSRLR ENREFIPLCV SALARSRADW LYGINMTRAY TILGRNAGYD GVLSVGRVQT PVLGLVVRRD EEIENFVSKD YFEVKAHIVT PADERFVAIW QPSESCEPYQ DEEGRLLHRS LADHVVKRIE GQPAFVTSYN DKRESEIAPL PYSLSTLQIE AAKRFGLSAQ QVLDVCQKLY ETHKLITYPR SDSRYLPEEH FAGRHAVLNA ISVHQPDLLP QPVMDVDRRN RCWDDGKVDA HHAIIPTARS ASASLTENER KVYGLVARQY IMQFCPDAVF RKCVIELDIA GGKFIAKARF LAEAGWRTLL GGKERDEENE GMPLPVVAKG DELLCERGEV VERQTQPPRP FTDATLLSAM TGIARFVQDK ELKKILRATD GLGTEATRAG IIELLFKRTF LFKKARYIHA SEAGRALIHS LPDSAAHPDM TAHWEATLTQ ISEKKCRYQD FMQPLTNSLQ ELIQQAKQNG AVRAFKGLSA PPSGASKRRK PQAKKAKEQK Q
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