| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2250 |
|---|
| Symbol | |
|---|
| ID | 8530650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2437406 |
|---|
| End bp | 2438743 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | PTS system ascorbate-specific transporter subunit IIC |
|---|
| Protein accession | YP_003259627 |
|---|
| Protein GI | 261821521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.280391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TTATCAATTT CATTGTGAAA GACTTATTAG GCCAGGCATC CATATTAATC
GCGCTGATCG CCATGATTGG GTTGATTTTA CAGAAGAAAT CGGTAGGGAA AATTGCAGAG
GGGACATTCA AGACACTGCT TGGTTTCCTC ATCATGATGG CAGGGATTAA CATCATCGTC
GATGCTCTGA CGTATTTGAA CAGTATCTTT ACCCACGGTT TCGGCATGAA AGGCTACATC
ACGGACGTCG CCGCCATCGC CGGATTGGCA AACCGCGAAC TTGGGTCAGA AGTCGCACTG
ACGCTGATGG TGATCTTTGC CGTCAACATC CTGATTGCGC GGATTACCCC CTTTAAATAT
ATCTTCCTGA CGGGGCAGGC TCTGCTGTGG ATGGCAACAA TCGGTACGGT GATCGGCTAT
AAGTCGGGCT TGACCGGCGC GACGTTGATC CTCACCGGCG GTATATTTGG CGGTATTATG
GCCGTGCTGA TGCCTGCGCT GGCGCAGCCG ATTGTCCGTA AAATCACAAA TTCCGATGAT
GTTGCACTGG GGCATTTTTG TACCATCGGG TATTTGGTGC AGGCCGCCGT CGCTCGGTTA
GTCGGTAAAA ACTCTAAATC TACAGAAGAT TTAACGCTGC CTGATAACTT CAAATTCTTG
CAGGACACTT ACCTGTCGAT GGCCGTCGTT ATGGTGCCGA TGTACCTCAT CCCCGCCTTG
GCTGCGGGGC CCGCCTACAT CGCGCAATAT GCCAACGGCG TCAACTATCT GATGTATTCC
TTCATGCAGT CCATGCAGTT TGTGGCGGGC GTTTTCGTTC TCTACAGCGG TGTACGGCTG
CTGCTTAATG AGCTGGTGCC TGCATTTCGA GGTATCGCCA TGCGTCTGGT GCCTAACGCT
AAACCCGCGT TGGATTGCCC GGTACTCTTC CCCTATGCAC CCAACGCCGT GATTGTTGGC
TTCCTCGCCA CCACCGTTGG TTCCATTCTG GGGATGCTGA TCTTCCCAAT GTTTGGATTG
GCGATGATTT TGCCAGGTTT ATTGACCAAC TTCTTTGCAG GCGGAACGGC GGGTATTTTC
GGTAACGCCA TGGGGGGACG GCGTGGCGCA ATTATCGGTG GTGTGGTTCA TGGCCTTTTT
ATTACCTTAT TGCCTGCCAT TCTGGTGCCA TTACTGGAAG TCTTCGGATT TACCGGCGTG
ACCTTCAGTG ACTCTGATGT CATTGGTACC GGGCTAATAT TAGGACACGC CTTCCAGCAA
GACTGGTTAT TTGTCGCTGC CTTTATCGCG TTCGTGGCAG TCATTGCCTT TATTGCAAAT
CGTAAACTGT CGCAATAA
|
|---|
| Protein sequence | MNTVINFIVK DLLGQASILI ALIAMIGLIL QKKSVGKIAE GTFKTLLGFL IMMAGINIIV
DALTYLNSIF THGFGMKGYI TDVAAIAGLA NRELGSEVAL TLMVIFAVNI LIARITPFKY
IFLTGQALLW MATIGTVIGY KSGLTGATLI LTGGIFGGIM AVLMPALAQP IVRKITNSDD
VALGHFCTIG YLVQAAVARL VGKNSKSTED LTLPDNFKFL QDTYLSMAVV MVPMYLIPAL
AAGPAYIAQY ANGVNYLMYS FMQSMQFVAG VFVLYSGVRL LLNELVPAFR GIAMRLVPNA
KPALDCPVLF PYAPNAVIVG FLATTVGSIL GMLIFPMFGL AMILPGLLTN FFAGGTAGIF
GNAMGGRRGA IIGGVVHGLF ITLLPAILVP LLEVFGFTGV TFSDSDVIGT GLILGHAFQQ
DWLFVAAFIA FVAVIAFIAN RKLSQ
|
|---|
| |