| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2246 |
|---|
| Symbol | |
|---|
| ID | 8530646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2435151 |
|---|
| End bp | 2436050 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003259623 |
|---|
| Protein GI | 261821517 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.101189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA TGACAACAGC CGAACACCGA GGATATCAAT TAATTTGTAA CGCAACGGGC
GCCATGATGG TTATTGCCTG CGATCAACGT GGCGGGATGC GAACATTATT AGCACCAACA
TCTGATGCGC AGGCTGCGAT TACCAATGAA ACATTAGGAA AAACAAAATA TGATATCACT
CGCTATCTGG CGGCTGAGGC GGGCTGTGTG CTGGTTGACC CGATCTGCGC CATACCGGGC
TTGATAGACG AAAATATTTT GCCTCGCGAT ACTGGCCTGC TCATCGGCCT TGATGCTTCT
GGCTGGGAAA CGAGCCCGGA AGGCTATCGG ATCTCCACTA TGGTTGAGGG CGTAACGGCC
CGTAAAGTAC GTGAATGGGG TGCCACTGGC GGAAAAATCA TGATCTACCT TCGCCCAGAT
ATCCCAGACG CTAATACCCG TAATCTTGAA ACACTTCGTG CCGTGATTCA GGACTTTGCA
CAGGAAGATT TACTGCTCGT CGTCGAATTT CTCACCTATT CCCTGGAAAA TGAATCCCGC
GAAGCCTATA CCCTCCGCCT GCCCGAGCTC ATTCCGGCCG GCTGTCAGGC CTGTATCGAT
CAAGGAGCAA AAGTCTTGAA AATTCCTTAT CCTGGATCGG ATGAAGCCTG TGCGCGTGTG
ACCACACTCT GCGGTGAAAT ACCCTGGGCC GTACTGTCTG CGGGCGTCGA TCACGCCACC
TTTCTCCCTC AGGTAGAGAG CGCGTTAAAA AATGGCGCTT CTGGCGTCAT CGCTGGCCGC
TCTCTCTGGA AGGATTGCAT CTCGCTCGAT CGCAACGTTT CTAAAGAGAA GCTCTCCACG
GTTGCCGTCT CCCGTCTCAA CGATATTCAG GCGCTGTTAA AACGGTATCA ACGCCCCTAG
|
|---|
| Protein sequence | MNTMTTAEHR GYQLICNATG AMMVIACDQR GGMRTLLAPT SDAQAAITNE TLGKTKYDIT
RYLAAEAGCV LVDPICAIPG LIDENILPRD TGLLIGLDAS GWETSPEGYR ISTMVEGVTA
RKVREWGATG GKIMIYLRPD IPDANTRNLE TLRAVIQDFA QEDLLLVVEF LTYSLENESR
EAYTLRLPEL IPAGCQACID QGAKVLKIPY PGSDEACARV TTLCGEIPWA VLSAGVDHAT
FLPQVESALK NGASGVIAGR SLWKDCISLD RNVSKEKLST VAVSRLNDIQ ALLKRYQRP
|
|---|
| |