| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2222 |
|---|
| Symbol | |
|---|
| ID | 8530622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2412705 |
|---|
| End bp | 2413163 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_003259599 |
|---|
| Protein GI | 261821493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGACG AAAAGAGCTT AGCGCACACC CGATGGAACT GTAAATATCA CATAGTTTTT
GCGCCGAAGT ATCGAAGGCA GGTGTTCTAC GGGGAAAAAC GCAAAGCGAT AGGCAGTATT
TTAAGAAAGC TGTGCGAATG GAAAAACGTG AATATTCTGG AAGCGGAATG CTGTGTGGAT
CACATCCATA TGCTTCTGGA AATCCCGCCG AAGATGAGTG TTTCGGGATT TATGGGGTAC
CTAAAGGGAA AGAGCAGCCT GATGCTTTAT GAGCAGTTTG GCGATTTGAA GTTCAAATAC
CGTAACAGGG AATTTTGGTG CCGAGGGTAT TACGTTGATA CGGTAGGGAA AAACACGGTC
AGGATACAAG AATACATAAA GCACCAGTTG GAAGAAGATA AAATGGGAAA GCAACTCTCG
ATCCCGTATC CCGGTAGCCC GTTTACGGGC CGTAAGTAA
|
|---|
| Protein sequence | MRDEKSLAHT RWNCKYHIVF APKYRRQVFY GEKRKAIGSI LRKLCEWKNV NILEAECCVD
HIHMLLEIPP KMSVSGFMGY LKGKSSLMLY EQFGDLKFKY RNREFWCRGY YVDTVGKNTV
RIQEYIKHQL EEDKMGKQLS IPYPGSPFTG RK
|
|---|
| |