Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2198 |
Symbol | |
ID | 8530598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2390088 |
End bp | 2391215 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003259575 |
Protein GI | 261821469 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.797187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAAG TTATTTTCAA TAAACTGGAA AAAGTATACT CCAACGGTTT CAAAGCCGTT CACGGCATCG ACCTGACGAT TAAAGACGGT GAATTCATGG TTATCGTCGG CCCGTCTGGC TGTGCGAAAT CAACGACGCT GCGTATGCTG GCGGGTCTGG AAACCATCAG CGGCGGTGAA GTACGTATCG GTGAGCGCGT TGTTAACAAT CTGGCACCGA AAGATCGCGG GATTGCCATG GTGTTCCAGA ACTATGCGCT CTACCCTCAC ATGACGGTAA AAGAGAACCT GGCGTTTGGT CTGAAGCTGA GCAAATTGCC TAAAGAGCAA ATTGAAGCGC AGGTCGCTGA AGCATCCAAA ATTCTGGAGC TGGAAGACCT GATGGATCGT CTGCCACGCC AACTGTCCGG TGGTCAGGCA CAGCGTGTAG CCGTAGGCCG TGCCATCGTT AAAAAACCAG ATGTGTTCCT GTTTGACGAA CCGTTGTCTA ACCTGGATGC CAAACTGCGT GCTTCCATGC GTATCCGTAT TTCTGACCTG CATAAGCAGT TGAAGAAAAG CGGTAAAGCA GCAACAACGG TATATGTTAC TCACGACCAG ACTGAAGCAA TGACCATGGG TGACCGTATC TGCGTGATGA AACTCGGTCA CATCATGCAG GTCGATACGC CGGATAACCT GTACCACTTC CCTGTCAACA TGTTCGTTGC TGGCTTCATT GGCTCACCAG AAATGAACAT TAAGCCGTGC AAACTGGTCG AGAAAGACGG TCAGATTGGC GTTGTTGTGG GTAATAACGC GCTGGTGTTA AATGCTGAAA AACAAGATAA AGTGCGCAGC TATGTCGGAC AAGATGTATT CTTCGGCGTT CGCCCAGACT ATGTTTCCGT GTCAGATACG CCATTTGAAG GCAGCCACTC ACAGGGTGAG CTGGTTCGCG TAGAAAACAT GGGTCACGAA TTCTTTATGT ACATTAAAGT CGATGGCTTT GAATTAACCA GCCGTATTCC TTATGACGAA GGTCGGCTGA TTATCGAGAA GGGACTGCAT CGTCCGGTAT ATTTCCAGTT CGACATGGAA AAATGCCATA TTTTTGATGC AAAAACAGAA AAAAATATCT CTCTTTAA
|
Protein sequence | MAEVIFNKLE KVYSNGFKAV HGIDLTIKDG EFMVIVGPSG CAKSTTLRML AGLETISGGE VRIGERVVNN LAPKDRGIAM VFQNYALYPH MTVKENLAFG LKLSKLPKEQ IEAQVAEASK ILELEDLMDR LPRQLSGGQA QRVAVGRAIV KKPDVFLFDE PLSNLDAKLR ASMRIRISDL HKQLKKSGKA ATTVYVTHDQ TEAMTMGDRI CVMKLGHIMQ VDTPDNLYHF PVNMFVAGFI GSPEMNIKPC KLVEKDGQIG VVVGNNALVL NAEKQDKVRS YVGQDVFFGV RPDYVSVSDT PFEGSHSQGE LVRVENMGHE FFMYIKVDGF ELTSRIPYDE GRLIIEKGLH RPVYFQFDME KCHIFDAKTE KNISL
|
| |