| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2176 |
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| Symbol | |
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| ID | 8530576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2367095 |
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| End bp | 2368261 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | Oligogalacturonide lyase |
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| Protein accession | YP_003259553 |
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| Protein GI | 261821447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00249856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG GTAACAAGAT TCCCCTAACG TTCCATACCT ATCAGGATTC AGCAACTGGC
ACCGAAGTTG TGCGTTTAAC CCCGCCCGAT GTTATCTGCC ACCGCAACTA TTTCTACCAG
AAATGTTTCT TCAATGACGG CAGCAAACTG CTGTTTGGTG CGGCATTTGA TGGTCCATGG
AATTACTATC TACTGGATTT AAAAGCGCAG AATGCCACGC AGTTGACGGA AGGCAAAGGC
GACAACACTT TCGGTGGTTT CCTGTCCCCG AATGACGATG CGCTGTATTA CGTTAAAAAT
ACCCGTAATC TGATGCGTGT CGATCTGGCT ACGTTGGAAG AGAAAACCAT TTATCAGGTG
CCTGACGATT GGGTCGGTTA CGGTACGTGG GTTGCCAATT CCGATTGCAC TAAGATGGTC
GGTATTGAGA TCAAAAAAGA AGACTGGAAA CCACTGACCG ATTGGAAAAA ATTCCAGGAG
TTCTATTTCA CTAATCCTTG CTGCCGCCTG ATTCGCGTCG ATTTGGTAAC AGGCGAAGCG
GAGACGATCC TTCAGGAGAA TCAGTGGCTG GGTCACCCAA TCTACCGTCC GGGTGATGAC
AACACGGTCG CTTTCTGCCA CGAAGGCCCG CACGATCTGG TTGATGCCCG TATGTGGTTC
ATCAACGAAG ACGGTACCAA CATGCGTAAA GTGAAAGAGC ATGCTGAAGG CGAAAGCTGT
ACCCACGAAT TCTGGGTACC AGATGGTTCC GCGATGATTT ACGTCTCTTA CCTTAAAGAC
GATACTAACC GCTATATCCG CAGTATCGAT CCCGTGACGC TGGAAGATCG TCAATTGCGC
ATCATGCCAC CGTGTTCTCA CCTGATGAGT AACTATGATG GCACGCTGTT GGTTGGTGAC
GGTTCCGATG CACCAGTCGA CGTGCAGGAT GATGGTGGCT ACAAGATTGA GAACGATCCG
TTCCTGTATG TTTTCAACCT GAAAACTGGC AAAGAACACC GTATTGCACA GCACAATACA
TCCTGGGAAG TGTTGGAAGG CGACCGTCAG GTTACTCACC CACACCCTTC TTTCACGCCG
GATAATAAAC AAGTCCTGTT TACTTCTGAC GTAGATGGAA AGCCTGCGCT GTATCTGGCG
AAGGTTCCTG ATTCAGTCTG GAACTAA
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| Protein sequence | MAKGNKIPLT FHTYQDSATG TEVVRLTPPD VICHRNYFYQ KCFFNDGSKL LFGAAFDGPW
NYYLLDLKAQ NATQLTEGKG DNTFGGFLSP NDDALYYVKN TRNLMRVDLA TLEEKTIYQV
PDDWVGYGTW VANSDCTKMV GIEIKKEDWK PLTDWKKFQE FYFTNPCCRL IRVDLVTGEA
ETILQENQWL GHPIYRPGDD NTVAFCHEGP HDLVDARMWF INEDGTNMRK VKEHAEGESC
THEFWVPDGS AMIYVSYLKD DTNRYIRSID PVTLEDRQLR IMPPCSHLMS NYDGTLLVGD
GSDAPVDVQD DGGYKIENDP FLYVFNLKTG KEHRIAQHNT SWEVLEGDRQ VTHPHPSFTP
DNKQVLFTSD VDGKPALYLA KVPDSVWN
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