Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2172 |
Symbol | |
ID | 8530572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2361973 |
End bp | 2363196 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003259549 |
Protein GI | 261821443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00749383 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTA AACCTGTTAA TCGGGGATTG ATTGTCCTCG GTACGATTAT TACCCAAATG GGACTCGGTA CGATTTACAC CTGGAGCCTA TTCAACCAGC CGCTGGTGGA CAAATTCGGC TGGGCACTAA GTTCCGTGGC GACAACGTTT TCAATTACCA GTTTCTGTCT GGCATTTGCA ACACTGTTTG CCGGTAAGTT TCAGGAGCGT ATTGGCCTGC GCCGCTTGAC CATGATCGCA GGTATCGCGC TGGGTGCGGG TCTGATGGCG AGCGCGGTTA GCCCATCGCT GACGCTGATT TATCTGCTAA TGGGTGTTGT TGTCGGTTTT GCTGATGGCA CAGCTTACAT CACGACGCTA TCCAATTTGA TTAAATGGTT CCCTAACCGC AAAGGGCTGA TCGCGGGTAT TTCGGTTGGC GCATTCGGTA CAGGAAGCCT GTTGTTCAAA TATGTAAACA GCTTTTTGAT TGCCGAAGTG GGCGTGTCTG AAGCCTTTTT CTACTGGGGA ATTATCGTTA TGGCGATGAT TCTGGTCGGG AGTTCCTTGC TGAAAGAGCC TGCTCCAGTG CCAGTACAGC AGGCTGCGCT TCAGGGGCAG GCGCGTGATT TCTCGCTGGC CGAGATGTTA GCAACCAAAG AATCGTATTT GCTGTTTATT ATCTTCTTCA CCGCATGCAT GAGCGGTCTG TATTTGATCG GTATTGTGAA AGATATTGGT GTGCAGATGG CCGGAATGGA TATGGCGACG GCGGCGAATG CGGTGTCTGC GATTGCGATT TTTAATACCG TTGGGCGTAT TGTGCTTGGG GCGCTTTCCG ATAATGTCGG ACGTATGCGA GTGATTAGCT TTACGCTGTT TGTGACGATT TTGGCAGTGT CCGTGATGAC CTTTCTGCCG CTTAGTCCAA TTCTATTCTT TACCTGTGTC AGCGCGATAG CCTTCTGTTT TGGTGGCAAT ATCACGGTAT TCCCAGCGAT TGTCGGCGAC TTCTTTGGCC TGAAAAATCA CAGCAAAAAC TACGGTGTAA TTTATCAGGG ATTCGGTATC GGCGCGTTGT CTGGCTCGTT TATCGCCGCA CAACTCGGGG GCTTCCATGC CACATTTATG GCAATCATCA TTATGTCTAT TATCTCGCTG CTGATTACCC TGTGGGTCAA ACCACCGAAG CACCAACCGG TGACGGACTC AATACCTGCA GACATGGCAC ATGCACAAAG TTAA
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Protein sequence | MNTKPVNRGL IVLGTIITQM GLGTIYTWSL FNQPLVDKFG WALSSVATTF SITSFCLAFA TLFAGKFQER IGLRRLTMIA GIALGAGLMA SAVSPSLTLI YLLMGVVVGF ADGTAYITTL SNLIKWFPNR KGLIAGISVG AFGTGSLLFK YVNSFLIAEV GVSEAFFYWG IIVMAMILVG SSLLKEPAPV PVQQAALQGQ ARDFSLAEML ATKESYLLFI IFFTACMSGL YLIGIVKDIG VQMAGMDMAT AANAVSAIAI FNTVGRIVLG ALSDNVGRMR VISFTLFVTI LAVSVMTFLP LSPILFFTCV SAIAFCFGGN ITVFPAIVGD FFGLKNHSKN YGVIYQGFGI GALSGSFIAA QLGGFHATFM AIIIMSIISL LITLWVKPPK HQPVTDSIPA DMAHAQS
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