Gene Pecwa_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_2170 
Symbol 
ID8530570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp2359297 
End bp2361042 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content48% 
IMG OID 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003259547 
Protein GI261821441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.041747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGAAA TATTTGAGAT GCTCCTCGCA GTCTTTGACC GCGCCGCCTT GATGCTGATT 
TGCCTGTTCT TCCTCACCAG GACGCGCCAG TTCCGGCAAT TGCTGCAAAA AGAGCAACAT
TCGCCGAGAG AGCGGGTGAC GGTGACGGCC ATCTTTTCAC TGTTTGCGCT GTTCGGTACG
TATTCTGGCA TTAATGTTGA AGGATCGCTC GTCAACGTGC GCGTGATTGC GGTGATGTCC
GGCGGAATCC TTTTTGGCCC TTGGGTCGGT ATCGCGACTG GCATCATTGC GGGAGCGCAC
CGTTATTTAA TTGATATTGA CGGCATTACC TCAATACCTT GCCTGATTAC CAGTATCATC
GCGGGTATCA CTTCCGGCTA CATCAATAAG AAAGTCAAAA AAGAGCAGCA ATGGAGCATC
GGGATTCTGG GCGGAATGCT GTGTGAGTCG TTAACGATGC TGCTGGTTGT GGCGTGGGCG
ACGCCGATCG AACTAGGGTT GGATATTGTT TCAAAAATTG CGGTGCCGAT GATTCTTGGC
TCTGTGTGTA TTGGCCTGAT CGTGTTACTG GTGCAGAGTG TGGCGAATGA AAAAGAGGTG
ATTGCCGCCA GACAAGCCAA ACTCGCGCTG GATATTGCAC ACAAGACACT GCCGTATTTC
CGCAATATTA ACAGTGATTC ACTGACGGCC ATTTGTAGAA TTATTCGTAC TGAAATTAAT
GCGGACGCGG TGGCAATAAC AAACACGCAG CATATTCAGG CTTACGTGGG GCTTGGGGAA
GATAAATATA ATATCGGCCA CGACATTATC AGCCCGATGA CGCAGCAGGC GATTCATGAT
GGGAAAATCA TCATTAAAAA TAATGATGAG CAGCATCTAA CGCCGGAAAT CCATTCGATG
ATTGTCATCC CGCTATGGGA GCACGGGCAA GTGACGGGCA CATTGAAAAT CTATTACCGC
CACGCCCATA AAATAACCTA TTCGTTACGT GTGATGGCCG TCGGTTTATC ACAAATTATG
TCAACGCAAA TTGAAGTCTC CCGCACAGAA CAACTGCGTG ATATGGCAAA TAAAGCGGAA
CTGAGGGCGT TGCAAAGCAA AATCAATCCG CACTTTCTTT TTAATGCACT AAATGCGATC
TCCTCATCTA TTCGTATTAA TCCTGATACG GCGCGCCAGT TGGTGATCAA TCTGTCCCGC
TATTTGCGCT ATAACCTCGA ACTCAACGAT GATGCGCTGA TCGATATAAA GAAAGAGCTA
TACCAAATTC AAGATTATAT CGCGATTGAG CAGGCGCGAT TTGGTGACAA GTTAACAGTG
ATTTACGATA TTGACGACGA TTTAGCGTAT AAAATTCCTA GCTTATTAAT TCAGCCTCTG
GTGGAAAACG CGATTGTTCA TGGTATTCAG CCTTGCCGAG GCAAAGGAAC CGTGGTGCTG
TCCGTGAAGG AACAGGGCGA CAAACTGCTC GTCGCGGTAA AAGACACCGG GCATGGCATT
AGTCAGGAAA CGATGGATCG TGTTGCGCGC AACGAGCTGC CGGGGAATAA GATTGGCCTG
CTGAATGTCC ATCATCGGGT GCGTTTGCTT TATGGTGATG GTCTGCGTAT TCGCCGTTTG
GAACCCGGAA CCGAGATTTA TTTCTACATC CCGCGAGCAG ATAAAACACC GTCGGCATTG
CCAGATAGCA TTCAGGTGCC AGCCTCGACC TATTCTGCTG CTGAACACCG AGGAGGAAAC
CCATGA
 
Protein sequence
MHEIFEMLLA VFDRAALMLI CLFFLTRTRQ FRQLLQKEQH SPRERVTVTA IFSLFALFGT 
YSGINVEGSL VNVRVIAVMS GGILFGPWVG IATGIIAGAH RYLIDIDGIT SIPCLITSII
AGITSGYINK KVKKEQQWSI GILGGMLCES LTMLLVVAWA TPIELGLDIV SKIAVPMILG
SVCIGLIVLL VQSVANEKEV IAARQAKLAL DIAHKTLPYF RNINSDSLTA ICRIIRTEIN
ADAVAITNTQ HIQAYVGLGE DKYNIGHDII SPMTQQAIHD GKIIIKNNDE QHLTPEIHSM
IVIPLWEHGQ VTGTLKIYYR HAHKITYSLR VMAVGLSQIM STQIEVSRTE QLRDMANKAE
LRALQSKINP HFLFNALNAI SSSIRINPDT ARQLVINLSR YLRYNLELND DALIDIKKEL
YQIQDYIAIE QARFGDKLTV IYDIDDDLAY KIPSLLIQPL VENAIVHGIQ PCRGKGTVVL
SVKEQGDKLL VAVKDTGHGI SQETMDRVAR NELPGNKIGL LNVHHRVRLL YGDGLRIRRL
EPGTEIYFYI PRADKTPSAL PDSIQVPAST YSAAEHRGGN P