Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2170 |
Symbol | |
ID | 8530570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2359297 |
End bp | 2361042 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003259547 |
Protein GI | 261821441 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.041747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCACGAAA TATTTGAGAT GCTCCTCGCA GTCTTTGACC GCGCCGCCTT GATGCTGATT TGCCTGTTCT TCCTCACCAG GACGCGCCAG TTCCGGCAAT TGCTGCAAAA AGAGCAACAT TCGCCGAGAG AGCGGGTGAC GGTGACGGCC ATCTTTTCAC TGTTTGCGCT GTTCGGTACG TATTCTGGCA TTAATGTTGA AGGATCGCTC GTCAACGTGC GCGTGATTGC GGTGATGTCC GGCGGAATCC TTTTTGGCCC TTGGGTCGGT ATCGCGACTG GCATCATTGC GGGAGCGCAC CGTTATTTAA TTGATATTGA CGGCATTACC TCAATACCTT GCCTGATTAC CAGTATCATC GCGGGTATCA CTTCCGGCTA CATCAATAAG AAAGTCAAAA AAGAGCAGCA ATGGAGCATC GGGATTCTGG GCGGAATGCT GTGTGAGTCG TTAACGATGC TGCTGGTTGT GGCGTGGGCG ACGCCGATCG AACTAGGGTT GGATATTGTT TCAAAAATTG CGGTGCCGAT GATTCTTGGC TCTGTGTGTA TTGGCCTGAT CGTGTTACTG GTGCAGAGTG TGGCGAATGA AAAAGAGGTG ATTGCCGCCA GACAAGCCAA ACTCGCGCTG GATATTGCAC ACAAGACACT GCCGTATTTC CGCAATATTA ACAGTGATTC ACTGACGGCC ATTTGTAGAA TTATTCGTAC TGAAATTAAT GCGGACGCGG TGGCAATAAC AAACACGCAG CATATTCAGG CTTACGTGGG GCTTGGGGAA GATAAATATA ATATCGGCCA CGACATTATC AGCCCGATGA CGCAGCAGGC GATTCATGAT GGGAAAATCA TCATTAAAAA TAATGATGAG CAGCATCTAA CGCCGGAAAT CCATTCGATG ATTGTCATCC CGCTATGGGA GCACGGGCAA GTGACGGGCA CATTGAAAAT CTATTACCGC CACGCCCATA AAATAACCTA TTCGTTACGT GTGATGGCCG TCGGTTTATC ACAAATTATG TCAACGCAAA TTGAAGTCTC CCGCACAGAA CAACTGCGTG ATATGGCAAA TAAAGCGGAA CTGAGGGCGT TGCAAAGCAA AATCAATCCG CACTTTCTTT TTAATGCACT AAATGCGATC TCCTCATCTA TTCGTATTAA TCCTGATACG GCGCGCCAGT TGGTGATCAA TCTGTCCCGC TATTTGCGCT ATAACCTCGA ACTCAACGAT GATGCGCTGA TCGATATAAA GAAAGAGCTA TACCAAATTC AAGATTATAT CGCGATTGAG CAGGCGCGAT TTGGTGACAA GTTAACAGTG ATTTACGATA TTGACGACGA TTTAGCGTAT AAAATTCCTA GCTTATTAAT TCAGCCTCTG GTGGAAAACG CGATTGTTCA TGGTATTCAG CCTTGCCGAG GCAAAGGAAC CGTGGTGCTG TCCGTGAAGG AACAGGGCGA CAAACTGCTC GTCGCGGTAA AAGACACCGG GCATGGCATT AGTCAGGAAA CGATGGATCG TGTTGCGCGC AACGAGCTGC CGGGGAATAA GATTGGCCTG CTGAATGTCC ATCATCGGGT GCGTTTGCTT TATGGTGATG GTCTGCGTAT TCGCCGTTTG GAACCCGGAA CCGAGATTTA TTTCTACATC CCGCGAGCAG ATAAAACACC GTCGGCATTG CCAGATAGCA TTCAGGTGCC AGCCTCGACC TATTCTGCTG CTGAACACCG AGGAGGAAAC CCATGA
|
Protein sequence | MHEIFEMLLA VFDRAALMLI CLFFLTRTRQ FRQLLQKEQH SPRERVTVTA IFSLFALFGT YSGINVEGSL VNVRVIAVMS GGILFGPWVG IATGIIAGAH RYLIDIDGIT SIPCLITSII AGITSGYINK KVKKEQQWSI GILGGMLCES LTMLLVVAWA TPIELGLDIV SKIAVPMILG SVCIGLIVLL VQSVANEKEV IAARQAKLAL DIAHKTLPYF RNINSDSLTA ICRIIRTEIN ADAVAITNTQ HIQAYVGLGE DKYNIGHDII SPMTQQAIHD GKIIIKNNDE QHLTPEIHSM IVIPLWEHGQ VTGTLKIYYR HAHKITYSLR VMAVGLSQIM STQIEVSRTE QLRDMANKAE LRALQSKINP HFLFNALNAI SSSIRINPDT ARQLVINLSR YLRYNLELND DALIDIKKEL YQIQDYIAIE QARFGDKLTV IYDIDDDLAY KIPSLLIQPL VENAIVHGIQ PCRGKGTVVL SVKEQGDKLL VAVKDTGHGI SQETMDRVAR NELPGNKIGL LNVHHRVRLL YGDGLRIRRL EPGTEIYFYI PRADKTPSAL PDSIQVPAST YSAAEHRGGN P
|
| |