Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2169 |
Symbol | |
ID | 8530569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2356979 |
End bp | 2359147 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_003259546 |
Protein GI | 261821440 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0648584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTG CCCCAATAAG CAAAGATGAA GATAAACGTC TTGCTGCTCT TCGTGAGTAT GGAATTAAGA ACGCACTATT CGATCCGAGT CTGAGCAACC TGATTAGTCT GGCTGCCAAC ATTTTTAACG CGCCCATCGT TTTAGTCTCG TTGGTGGAAG CTGAGCGCCA ATTGTTTGCC GCCAGCGTAG GGGTTCCTTT TTGCGAAACA CCACGCGATA TCTCCTTTTG CGCCCATACG ATCTTGAAGA AAAAGATCAT GGTGGTGCCT GATGCACTCA AGGATGTGCG ATTCAAAAAT AATCCGCTGG TTGTGGGAAT TCCCTATATC CGTTTTTATG CCGGGATACC CTTAATTACC TCGTCTGGGC ATGCCATTGG CACGTTATGT ATTATTGATT TGAAGCCCAG AGCAGCATTC ACCAAGCGTG ATGAGCACAA TTTGCAGGAT CTGGCATCAC TGGTCATGGA CAAGCTGGAA ATGCGGCGTC TGGAATTGGC GCGTAAGGCC AGTCAGGTGC GTTTTGAAAA TATCGCTAAT ACCTCGCCAG ATACGATTTT ATGCGTTAAC GAGAAGGGAA TGATTACCTT CTGGAATGCA GCCGCAGAGA AGATGCTGGA ATACCGCGAC GATGAAATTA TCGGCCAAAA TATTAATCGC ATCGTACCTG ATGCCTTTAT CGTGCAGCTT AACCATCTGG TCACTGACCG TGATTCCCTG ATGAAAGGGG TGACGCTGGA GCTGAACGTA CAAGCCAAAA GCGGTAGCCT GGTTCCGGTT GAATTGTCGG TTTCTATGTG GGAAGACAAC GACAATGTTA GCTATGGCGC GATATTGCGC GACATTACCG AGCGTCGCCG CAACGAAGAG CGGCTGTTTT TACTGGCGCA CATGGACCCA CTGACGGGGT TGGCAAACCG GACATTATTA ACATCAAATC TGGAAACCGC GCTCAAGAAT GAGCCTGCGG TCTGCATCAT GATGGTCGAT CTGGATGGAT TTAAAGATGT TAATGACAGT CTGGGGCACT CTAGCGGCGA TGATATTTTG GTGCACGTTG CCAAAAAAAT AAAAGCGACG GTTCGTTCCG GTGATGTAGT CGCGAGAATG GGCGGAGATG AATTTGCGCT GCTGTTTCCG GGTCTGAGTG ATAAAAAAGT TGCAGGTAAA ATTGCCGAAC AAATTATCCA TGAAATTTCG CAGGCAATGA TTATTGACGA TCACCAAATC AATATTAGTG CCAGCATTGG TGCTGTGTTG TACCCGGAAT ATGGCGTCAC TGTGCAGGAT CTTTTGACCA GTGCAGATTT AGCTCTGTAT CAGGCGAAAT CTGAAGGTCG GAACTGTTAT CGTTTTTTCA CGCGCGAACT ACTTGAAGTC TTTCAGGCTA AGCATGCCTT CCAGTTAGAG TTTGTACGAG CTTATGAGCA GCATGAATTT GAAATGTTCT ATCAACCACA GGTAAAACTG GCAACAAATG AGATTGTTGG TGCGGAGGCA TTGTTACGCT GGCGTCACCC AGAGAGAGGG CTACTTGGGC CTGCAGCATT TCTTACCGCA CTGGAAAATG GCCCGTGGGC GGAACGAGTA GGGGATTGGA TCGTAGAAAC GGCCTGTCGG CAAGCGGCAG AGTGGTGTCA GGTTAGCAAC AGCTATTTTC GTATCAGCAT TAACCTTTTC AGCGCGCAGT TTCGTACAGG CATGTTGGCG CAAAAGATTA TGGGTGCCCT CGCTCGTACC GGGTTACAGC CAAGTTCGCT GGAGCTGGAA ATCACGGAAA ATATCATTCT GCGTTACGAT GAAAATATGT TACAGCCATT GAAAACGCTG CGTGATGCGG GGATCGGGAT TGCCTTTGAT GACTATGGGA CGGGCTATGC GTCGCTCAGT ATGCTGAAAA ATTACCCGGT GACTCGGCTT AAGATCGATC AAACCTTTGT CAGGACCATG TGTGAGTCTC CGCCGGATGC GGCGATTGTC AGAGCAATTC TCTATCTTGG GAAAAGTTTC GGTCTCGGCG TGATTGCAGA AGGGGTTGAG ACTTTGGAGC AGAGTGAACG ACTGCGAGGC AAAGGGTGTG AAGAAGCACA GGGATATCTG TTTGGGCATC CGATGCCCGC AGAAGAATTT ACCCAGCTAC TGAAGTTGAA TAAACCAATA GACGTGTAA
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Protein sequence | MSRAPISKDE DKRLAALREY GIKNALFDPS LSNLISLAAN IFNAPIVLVS LVEAERQLFA ASVGVPFCET PRDISFCAHT ILKKKIMVVP DALKDVRFKN NPLVVGIPYI RFYAGIPLIT SSGHAIGTLC IIDLKPRAAF TKRDEHNLQD LASLVMDKLE MRRLELARKA SQVRFENIAN TSPDTILCVN EKGMITFWNA AAEKMLEYRD DEIIGQNINR IVPDAFIVQL NHLVTDRDSL MKGVTLELNV QAKSGSLVPV ELSVSMWEDN DNVSYGAILR DITERRRNEE RLFLLAHMDP LTGLANRTLL TSNLETALKN EPAVCIMMVD LDGFKDVNDS LGHSSGDDIL VHVAKKIKAT VRSGDVVARM GGDEFALLFP GLSDKKVAGK IAEQIIHEIS QAMIIDDHQI NISASIGAVL YPEYGVTVQD LLTSADLALY QAKSEGRNCY RFFTRELLEV FQAKHAFQLE FVRAYEQHEF EMFYQPQVKL ATNEIVGAEA LLRWRHPERG LLGPAAFLTA LENGPWAERV GDWIVETACR QAAEWCQVSN SYFRISINLF SAQFRTGMLA QKIMGALART GLQPSSLELE ITENIILRYD ENMLQPLKTL RDAGIGIAFD DYGTGYASLS MLKNYPVTRL KIDQTFVRTM CESPPDAAIV RAILYLGKSF GLGVIAEGVE TLEQSERLRG KGCEEAQGYL FGHPMPAEEF TQLLKLNKPI DV
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