Gene Pecwa_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_2169 
Symbol 
ID8530569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp2356979 
End bp2359147 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content48% 
IMG OID 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_003259546 
Protein GI261821440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0648584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTG CCCCAATAAG CAAAGATGAA GATAAACGTC TTGCTGCTCT TCGTGAGTAT 
GGAATTAAGA ACGCACTATT CGATCCGAGT CTGAGCAACC TGATTAGTCT GGCTGCCAAC
ATTTTTAACG CGCCCATCGT TTTAGTCTCG TTGGTGGAAG CTGAGCGCCA ATTGTTTGCC
GCCAGCGTAG GGGTTCCTTT TTGCGAAACA CCACGCGATA TCTCCTTTTG CGCCCATACG
ATCTTGAAGA AAAAGATCAT GGTGGTGCCT GATGCACTCA AGGATGTGCG ATTCAAAAAT
AATCCGCTGG TTGTGGGAAT TCCCTATATC CGTTTTTATG CCGGGATACC CTTAATTACC
TCGTCTGGGC ATGCCATTGG CACGTTATGT ATTATTGATT TGAAGCCCAG AGCAGCATTC
ACCAAGCGTG ATGAGCACAA TTTGCAGGAT CTGGCATCAC TGGTCATGGA CAAGCTGGAA
ATGCGGCGTC TGGAATTGGC GCGTAAGGCC AGTCAGGTGC GTTTTGAAAA TATCGCTAAT
ACCTCGCCAG ATACGATTTT ATGCGTTAAC GAGAAGGGAA TGATTACCTT CTGGAATGCA
GCCGCAGAGA AGATGCTGGA ATACCGCGAC GATGAAATTA TCGGCCAAAA TATTAATCGC
ATCGTACCTG ATGCCTTTAT CGTGCAGCTT AACCATCTGG TCACTGACCG TGATTCCCTG
ATGAAAGGGG TGACGCTGGA GCTGAACGTA CAAGCCAAAA GCGGTAGCCT GGTTCCGGTT
GAATTGTCGG TTTCTATGTG GGAAGACAAC GACAATGTTA GCTATGGCGC GATATTGCGC
GACATTACCG AGCGTCGCCG CAACGAAGAG CGGCTGTTTT TACTGGCGCA CATGGACCCA
CTGACGGGGT TGGCAAACCG GACATTATTA ACATCAAATC TGGAAACCGC GCTCAAGAAT
GAGCCTGCGG TCTGCATCAT GATGGTCGAT CTGGATGGAT TTAAAGATGT TAATGACAGT
CTGGGGCACT CTAGCGGCGA TGATATTTTG GTGCACGTTG CCAAAAAAAT AAAAGCGACG
GTTCGTTCCG GTGATGTAGT CGCGAGAATG GGCGGAGATG AATTTGCGCT GCTGTTTCCG
GGTCTGAGTG ATAAAAAAGT TGCAGGTAAA ATTGCCGAAC AAATTATCCA TGAAATTTCG
CAGGCAATGA TTATTGACGA TCACCAAATC AATATTAGTG CCAGCATTGG TGCTGTGTTG
TACCCGGAAT ATGGCGTCAC TGTGCAGGAT CTTTTGACCA GTGCAGATTT AGCTCTGTAT
CAGGCGAAAT CTGAAGGTCG GAACTGTTAT CGTTTTTTCA CGCGCGAACT ACTTGAAGTC
TTTCAGGCTA AGCATGCCTT CCAGTTAGAG TTTGTACGAG CTTATGAGCA GCATGAATTT
GAAATGTTCT ATCAACCACA GGTAAAACTG GCAACAAATG AGATTGTTGG TGCGGAGGCA
TTGTTACGCT GGCGTCACCC AGAGAGAGGG CTACTTGGGC CTGCAGCATT TCTTACCGCA
CTGGAAAATG GCCCGTGGGC GGAACGAGTA GGGGATTGGA TCGTAGAAAC GGCCTGTCGG
CAAGCGGCAG AGTGGTGTCA GGTTAGCAAC AGCTATTTTC GTATCAGCAT TAACCTTTTC
AGCGCGCAGT TTCGTACAGG CATGTTGGCG CAAAAGATTA TGGGTGCCCT CGCTCGTACC
GGGTTACAGC CAAGTTCGCT GGAGCTGGAA ATCACGGAAA ATATCATTCT GCGTTACGAT
GAAAATATGT TACAGCCATT GAAAACGCTG CGTGATGCGG GGATCGGGAT TGCCTTTGAT
GACTATGGGA CGGGCTATGC GTCGCTCAGT ATGCTGAAAA ATTACCCGGT GACTCGGCTT
AAGATCGATC AAACCTTTGT CAGGACCATG TGTGAGTCTC CGCCGGATGC GGCGATTGTC
AGAGCAATTC TCTATCTTGG GAAAAGTTTC GGTCTCGGCG TGATTGCAGA AGGGGTTGAG
ACTTTGGAGC AGAGTGAACG ACTGCGAGGC AAAGGGTGTG AAGAAGCACA GGGATATCTG
TTTGGGCATC CGATGCCCGC AGAAGAATTT ACCCAGCTAC TGAAGTTGAA TAAACCAATA
GACGTGTAA
 
Protein sequence
MSRAPISKDE DKRLAALREY GIKNALFDPS LSNLISLAAN IFNAPIVLVS LVEAERQLFA 
ASVGVPFCET PRDISFCAHT ILKKKIMVVP DALKDVRFKN NPLVVGIPYI RFYAGIPLIT
SSGHAIGTLC IIDLKPRAAF TKRDEHNLQD LASLVMDKLE MRRLELARKA SQVRFENIAN
TSPDTILCVN EKGMITFWNA AAEKMLEYRD DEIIGQNINR IVPDAFIVQL NHLVTDRDSL
MKGVTLELNV QAKSGSLVPV ELSVSMWEDN DNVSYGAILR DITERRRNEE RLFLLAHMDP
LTGLANRTLL TSNLETALKN EPAVCIMMVD LDGFKDVNDS LGHSSGDDIL VHVAKKIKAT
VRSGDVVARM GGDEFALLFP GLSDKKVAGK IAEQIIHEIS QAMIIDDHQI NISASIGAVL
YPEYGVTVQD LLTSADLALY QAKSEGRNCY RFFTRELLEV FQAKHAFQLE FVRAYEQHEF
EMFYQPQVKL ATNEIVGAEA LLRWRHPERG LLGPAAFLTA LENGPWAERV GDWIVETACR
QAAEWCQVSN SYFRISINLF SAQFRTGMLA QKIMGALART GLQPSSLELE ITENIILRYD
ENMLQPLKTL RDAGIGIAFD DYGTGYASLS MLKNYPVTRL KIDQTFVRTM CESPPDAAIV
RAILYLGKSF GLGVIAEGVE TLEQSERLRG KGCEEAQGYL FGHPMPAEEF TQLLKLNKPI
DV