Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2151 |
Symbol | |
ID | 8530551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2342024 |
End bp | 2342713 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | DNA-binding transcriptional regulator PhoP |
Protein accession | YP_003259532 |
Protein GI | 261821426 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0601047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTC TGGTCGTTGA AGATAATGTA TTACTACTCC ATCATTTAAC CGTTCAGATG AACGAAATGG GGCATCAGGT TGACGCCGCG TCTGACGCTA AAGAAGCGGA TTATTTTTTG CATGAAAACA TGCCGGACAT TGCGATTGTC GACCTCGGAC TGCCCGATGA AGATGGGATG AGCATGATCC GTCGCTGGCG TGCCAATCAG GCCAAGCTGC CTATTCTGGT ACTGACTGCG CGTGAAGGTT GGCAAGACAA AGTTGCCGTG CTGGAAGCCG GTGCGGATGA CTACGTAACG AAACCCTTCC ATATGGAAGA AGTCGTGGCA CGTCTGCAGG CGCTGATGCG ACGCAACAGC GGGTTGGCAT CACAAATCAT CAGCCTACCG CCCTTTGAGG TTGATTTGTC GCGGCGCGAA TTGGTGATCC ACAGCACCCC CATCAAGTTA ACCGCGTTTG AATACACCAT TATCGAGACG TTGATTCGCA ACACAGGTAA AGTCGTCAGC AAAGACTCCC TGATGCTACA ACTGTATCCA GATGCGGAGT TGCGGGAAAG TCATACCATC GATGTGTTGA TGGGCCGATT ACGCAAGAAA ATTCAGCAGG CCGACGCACC GGATGTGATC ACTACCGTGC GTGGGCAAGG ATATCGTTTT GATATTGATA CACCCTCAGG CTCGGTATGA
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Protein sequence | MRILVVEDNV LLLHHLTVQM NEMGHQVDAA SDAKEADYFL HENMPDIAIV DLGLPDEDGM SMIRRWRANQ AKLPILVLTA REGWQDKVAV LEAGADDYVT KPFHMEEVVA RLQALMRRNS GLASQIISLP PFEVDLSRRE LVIHSTPIKL TAFEYTIIET LIRNTGKVVS KDSLMLQLYP DAELRESHTI DVLMGRLRKK IQQADAPDVI TTVRGQGYRF DIDTPSGSV
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