Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2148 |
Symbol | |
ID | 8530548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2337900 |
End bp | 2339132 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidase T |
Protein accession | YP_003259529 |
Protein GI | 261821423 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.32908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAC TACTCGACAG ATTTTTGAAC TACGTTTCAT TTGATACACA GTCTAAATCC GGCGTTCGGC AGGTGCCGAG CACTGATGGT CAATTGAAAC TGGCGCGTGC GTTACAGCAG GAACTGCTCG ATCTGGGATT TGAACAGATC GCATTGAGCA AACAGGGTTG CCTAACGGCG ACGCTTCCGG CGAACGTTGC CTGGTCAGTG CCGGCTATCG GCTTTATTTC ACATATGGAT ACGTCACCGG ATTTTAGCGG CAAAAATGTG AATCCGCAGA TTTTGGAAAA CTATCGCGGC GGCGACATTG CCTTGGGTAT GGGGGATGAA GTGCTGTCAC CGGTGATGTT CCCTGTGCTG CATCAGCTAC TGGGACACAC GCTGATTACG ACAGATGGCA AAACGCTGCT GGGGGCGGAT GATAAAGCGG GGATCGCGGA GATTATTACC GCGCTGGTGC GTCTGAGAAA AAACCAACTG CCGCACGGCG ATATTCGTAT TGCCTTTACG CCCGATGAAG AAATTGGTAA GGGCGCGCAG TTTTTTGATG TCAAAGCGTT TAATGCGCAG TGGGCCTATA CCGTGGACGG CGGTGGTGTC GGCGAACTGG AGTATGAGAA TTTTAATGCC GCGTCGGTTC AAGTGAAAAT CGTGGGCAAC AATGTGCATC CCGGTAGTGC GAAGGGTGTG ATGGTCAATG CGCTAACGCT GGCCTCTCGC TATCATCAGT ATGTGCCAGC GAATGAATCG CCGGAGCAGA CGGACGGCTA TCAAGGGTTC TACCACCTTC ACAGCATGAA AGGTTCTGTG GAGCGGGCAG ATCTGCACTA CATCGTCAGG GATTTTGACC ACAACGGCTT TGAACGGCGC AAGCAGGTGA TGCTGGATAT TGCGGAAAAG GTCGGCGTGG GGCTGCATCC GGATTGCTAT ATCGAAGTCA CGATTACTGA TACTTATTAC AATATGCGTG AGCAGGTTGA GCAGCACCCG CACATTATCG CGTTGGCACA ACAGGCGATG CGGGATTGCG ATATTGAACC GAATATGAAG CCGATTCGTG GTGGTACTGA CGGCGCACAC CTGTCATTCC TGGGGTTACC GTGCCCGAAT TTGTTTACCG GCGGCTACAA CTATCATGGC AAACATGAAT TTGTCACGCT GGAAGGCATG GAAAAGGCCG TGTCTGTGAT TATGCGCATT GCCGAGCTGA CGGCGCTGCG TGCAAAACCG TAA
|
Protein sequence | MDKLLDRFLN YVSFDTQSKS GVRQVPSTDG QLKLARALQQ ELLDLGFEQI ALSKQGCLTA TLPANVAWSV PAIGFISHMD TSPDFSGKNV NPQILENYRG GDIALGMGDE VLSPVMFPVL HQLLGHTLIT TDGKTLLGAD DKAGIAEIIT ALVRLRKNQL PHGDIRIAFT PDEEIGKGAQ FFDVKAFNAQ WAYTVDGGGV GELEYENFNA ASVQVKIVGN NVHPGSAKGV MVNALTLASR YHQYVPANES PEQTDGYQGF YHLHSMKGSV ERADLHYIVR DFDHNGFERR KQVMLDIAEK VGVGLHPDCY IEVTITDTYY NMREQVEQHP HIIALAQQAM RDCDIEPNMK PIRGGTDGAH LSFLGLPCPN LFTGGYNYHG KHEFVTLEGM EKAVSVIMRI AELTALRAKP
|
| |