Gene Pecwa_2140 details

Gene Information

• Locus tag: Pecwa_2140
• ID: 8530540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2329007
• End bp: 2329765
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 52%
• Product: putative solute/DNA competence effector
• Protein accession: YP_003259521
• Protein GI: 261821415

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATC AACCTAAGTT GAACAGTAGT AAAGAAGTCA TAGCCTTTTT GGCAGAGCGG 
TTCCCGCTTT GTTTCACCAC TGAAGGTGAA ACGCGTCCGT TAAAGATCGG TATTTTTCAA 
GATCTTGTTG AGCGTGTACC GGAATCCGAT AACGTCAGTA AGACGCAATT ACGCTCTGCG 
CTGCGTCTTT ACACCTCAAG CTGGCGGTAT CTGTATGGTG TAAAATTAGG TGCCCAACGG 
GTCGATCTGG ACGGTAACCC GTGTGGTGAG TTGGAGCAGC AGCATGTCGA TCATGCCCGC 
ACGCAGTTGG AAGAAGCGAA AGCGCGAGTT CAGGCTCAGC GTGCTGAGCA GCAGGCGAAA 
AAACGTGAAG CAGCCGGAGA GACGGCAGAT GCAGCGCGTA CGCCTCGTCC CGCTCAGAGA 
CGTACGCCGC GTCGCGATGC TTCAAACGAT GCATCTCGAA ACCATGCATC TCAAAACCAT 
GCACCGCGTA AACCACGCCA GCCTTCTCCC GGCCAATCTC AGTCCTCTTC TCAGCAACCA 
GCGAATGCTC AACCGCGTCA GGCAAAACCT GCCAATAATG AGCGTCAGCG GGTTGCGGTT 
ACAGATGTTT CCAAACTGCA AATCGGTCAG GAAATCAAAG TCAGAGCCGG CAAAGACGCC 
ATGGATGCCA CCGTGCTTGA AATTGCCAAA GGCGAAGTCA GGGTACAATT GGCTTCTGGA 
CTGGCAATGA TTGTACGCGC AGAACACTTG CAGTTCTGA 

 

Protein sequence

MENQPKLNSS KEVIAFLAER FPLCFTTEGE TRPLKIGIFQ DLVERVPESD NVSKTQLRSA 
LRLYTSSWRY LYGVKLGAQR VDLDGNPCGE LEQQHVDHAR TQLEEAKARV QAQRAEQQAK 
KREAAGETAD AARTPRPAQR RTPRRDASND ASRNHASQNH APRKPRQPSP GQSQSSSQQP 
ANAQPRQAKP ANNERQRVAV TDVSKLQIGQ EIKVRAGKDA MDATVLEIAK GEVRVQLASG 
LAMIVRAEHL QF