| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2082 |
|---|
| Symbol | |
|---|
| ID | 8530482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2273516 |
|---|
| End bp | 2274481 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003259468 |
|---|
| Protein GI | 261821362 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.284324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTC AGTTACCCTC TGTGGAACGT GTCGCAGAAT CTACCGTATC CACCCGACGC
CCGCGTATTG GTGTTGTCGG GCTGGGATCT ATCGCGCAGA AAGCTTATTT GCCCATTCTC
AGTCAGGCTG AGCGCTGGGA ACTGGTAGGT GCCTATTCTC CCGACCAGCA AAAAACGCAG
CGGATTTGCC AGCACTATCG GATGACGAGT TTCTCTGCGT TGGATGCGTT AGCGGCACAC
TGTGATGCGG TTTTCGTTCA TAGCAGCACC GCGAGTCATT TTTCCGTGGT GAGTCAACTG
CTTAAGGCGG GCGTCGATGT TTATGTGGAT AAACCGCTGG CAGAGACGCT GGAACAGGCG
GAAGCGTTGG TCGAATTGGC GGAGCAACAA CAAAAAATTT TGATGGTCGG TTTCAATCGC
CGTTTTGCCC CTTGTTATCA GCAGCTAAAA CAGCGGTTGG ATCAACCCGC CTCTTTGCGT
ATGGATAAAC ACCGAATTGA TAGCGTCGGG CCACAGGATG TGCGTTTTAC CTTACTGGAT
GATTATCTGC ATGTGGTGGA TACTGCGCTA TGGCTGGCAG GAGGTGATGC CGAATTGAAC
GATGGTGTTC TGCATGCCAA TGCGGACGGC CAATTGTTGT ATGCCGAGCA TCATTTCCAG
AGTGGCAACT GTCAGGTGAC GACCAGTATG CATCGTCAGG CCGGTAGCCA GCGGGAATGG
GTTCAGGCTG TCGCCAAAGG GAACCTATAT CAAGTCGATG AGATGCGTGG ATGGCGTGAA
GATCGTGAAG GGATGACGTT CACCCCAGCG GTGCCATCCT GGCAAACTAC GCTAGAACAA
CGCGGGTTTG TCGGTGCCGT GCATCATTTC ATGACGGCGA TTGAGCAACG GAAACCAGCG
GAAACGTCAG GTAATCAGGC GTTACTGTCC CAGCGTATGA TTGAGAAATT GCTGAGAAAA
AGCTGA
|
|---|
| Protein sequence | MKPQLPSVER VAESTVSTRR PRIGVVGLGS IAQKAYLPIL SQAERWELVG AYSPDQQKTQ
RICQHYRMTS FSALDALAAH CDAVFVHSST ASHFSVVSQL LKAGVDVYVD KPLAETLEQA
EALVELAEQQ QKILMVGFNR RFAPCYQQLK QRLDQPASLR MDKHRIDSVG PQDVRFTLLD
DYLHVVDTAL WLAGGDAELN DGVLHANADG QLLYAEHHFQ SGNCQVTTSM HRQAGSQREW
VQAVAKGNLY QVDEMRGWRE DREGMTFTPA VPSWQTTLEQ RGFVGAVHHF MTAIEQRKPA
ETSGNQALLS QRMIEKLLRK S
|
|---|
| |