Gene Pecwa_2054 details

Gene Information

• Locus tag: Pecwa_2054
• ID: 8530453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2239897
• End bp: 2240544
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 52%
• Product: beta-lactamase domain protein
• Protein accession: YP_003259440
• Protein GI: 261821334

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.128768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATC AAATCGTCCC GGTGACGGCA TTTAGCCAGA ACTGCACATT GTTATGGTGT 
GAAAAAACCA ATGAGGCAGC AATTGTCGAT CCCGGTGGGG ACGCTGAAAA AATCAAACAT 
GCCGTCGCAG ATGCAGGGAT TTTGGTTAAA CAGATTCTGT TGACGCATGG TCATCTGGAT 
CACGTAGGTG CAGCAGCAGA ACTGGCAGAG CACTATCAGG TGCCGATTAT TGGCCCGCAG 
ATTGAAGATG CTTTCTGGCT GGAAGGTTTA CCTGCACAGA GCCGGATGTT TGGCTTGGAA 
GAGTGCGCGC CGCTGACACC ATCACGCTGG CTGCAGGACG GTGATGAGGC CCGCGTGGGG 
GAGACGACAC TGGCGGTTTT CCATTGTCCT GGTCATACAC CGGGCCACAT TGTTTTCTTT 
GATGCTGAAT CACGGCTGGC ACAGGTTGGC GATGTGATTT TCAACGGTGG CGTAGGGCGT 
ACTGATTTCC CTCAAGGCGA TCATCAGGCG TTGATCGCGT CCATCAAGAA TAAGCTGCTG 
CCGCTGGGTG ACGACGTGAC GTTTATTCCG GGGCATGGTC CAATGTCGAC ACTAGGACAT 
GAGCGTAAAA CCAATCCTTT CCTGCGCGAA GATGCCGCAA TTTGGTAA 

 

Protein sequence

MKYQIVPVTA FSQNCTLLWC EKTNEAAIVD PGGDAEKIKH AVADAGILVK QILLTHGHLD 
HVGAAAELAE HYQVPIIGPQ IEDAFWLEGL PAQSRMFGLE ECAPLTPSRW LQDGDEARVG 
ETTLAVFHCP GHTPGHIVFF DAESRLAQVG DVIFNGGVGR TDFPQGDHQA LIASIKNKLL 
PLGDDVTFIP GHGPMSTLGH ERKTNPFLRE DAAIW