Gene Pecwa_2038 details

Gene Information

• Locus tag: Pecwa_2038
• ID: 8530437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2218004
• End bp: 2218762
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 49%
• Product: ABC transporter related protein
• Protein accession: YP_003259424
• Protein GI: 261821318

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGAGA TCGGCAATGT AACTAAAACA TATAATAATG TGACGGTATT GAATAATGTC 
ACGGCGACGG TGCCTCGTGG TGGCGTTACG TCGATTATCG GCCCGAATGG TGCAGGAAAA 
TCGACACTGT TATCCATCAT CAGTCGCTTG CTGGATGCGG ATCAAGGGCA GGTAAAAGTC 
AATGGCATGG ATGTCATGAC AACGCCAAGC GATAAACTGG CGACGTGCTT GTCTGTTCTA 
CGACAGGAAA ATCAGTTTAC CAGCCGCCTA ACGGTAGCAG AATTGGTGGG CTTTGGGCGC 
TATCCCTATA CCAAAGGGCG ACTGAACGCG GATGACCAAG AACGTATCAG CGCTGCGCTG 
GCTTTCCTCA ATTTGACTGA GCTGAAAGAT CGGTTTTTAG ACGAGCTTTC CGGTGGTCAG 
CGGCAGCGTG CCTATGTTGC GATGGTGCTG TGTCAGGATA CGGAGTATGT GTTACTGGAT 
GAACCGCTGA ATAATCTGGA TATGAAACAC GCCGTGGCGA TGATGAAGCA GATTCGCCGT 
GCAGCCGATG AGTTAGGTAA AACCATCGTG CTGGTGATCC ACGATATCAA CTTTGCTTCC 
GCCTATTCGG ACTACATTAT TGCTATGCGC AAAGGGCAGA TTATCTATAC GGGAAAACCG 
GAAGACATCA TGGTGTCCGA TGTGCTGGAA GACATTTTCG ATACAGAAGT GGCTATTGAA 
GAGGTTCATA ATCAGCGCAT CGCGGTATAT TACCGCTAA 

 

Protein sequence

MIEIGNVTKT YNNVTVLNNV TATVPRGGVT SIIGPNGAGK STLLSIISRL LDADQGQVKV 
NGMDVMTTPS DKLATCLSVL RQENQFTSRL TVAELVGFGR YPYTKGRLNA DDQERISAAL 
AFLNLTELKD RFLDELSGGQ RQRAYVAMVL CQDTEYVLLD EPLNNLDMKH AVAMMKQIRR 
AADELGKTIV LVIHDINFAS AYSDYIIAMR KGQIIYTGKP EDIMVSDVLE DIFDTEVAIE 
EVHNQRIAVY YR