Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2011 |
Symbol | hisD |
ID | 8530410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2187684 |
End bp | 2189012 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | histidinol dehydrogenase |
Protein accession | YP_003259397 |
Protein GI | 261821291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.862973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA ACACCAAAAG CATCGGCAAT TTCAGCTCGA TCGTTGACTG GCAGCGCTGT TCAGCAGAAG AACAACGTCA GTTGTTGACA CGCCCGGCTA TTTCCGCGTC AGACCGCATT ACCGCCGTCG TGAGCGATAT TCTGACCAAC GTGAAAAGCC GTGGTGATAG CGCTTTACGC GACTACAGCG CACAGTTCGA TAAGGTTCAG GTGAATGCAA TTCGCGTCAC CGATGCTGAG ATTACCGCCG CATCTGCCCG TCTGGGTGAT GAAGTAAAAC AGGCCATGGC AATCGCCGTG CGTAATATCG AGACATTCCA CAACGCGCAA AAACTGCCGA TTGTCGATAT CGAAACGCAG CCAGGCGTGC GTTGCCAGCA GATTACTCGC CCTATCGCGA CCGTTGGTCT GTATATTCCC GGGGGATCGG CGCCGCTGCC GTCAACAGTG CTGATGCTGG GAACGCCTTC ACGCATCGCC GGCTGTGGCC GTGTGGTGCT GTGTTCACCA CCGCCGATCG CCGATGAAAT TCTGTATGCT GCACAACTGT GCGGCATTAA AGAAGTCTTT CAGCTTGGTG GCGCGCAAGC GATTGCTGCC ATGGCGTTTG GCACCGATAG TGTGCCGAAA GTGGATAAAA TTTTTGGCCC CGGCAATGCC TACGTCACGG AAGCTAAGCG CCAGGTCAGC CAGCAGCTTG ATGGTGCAGC GATTGATATG CCCGCAGGGC CATCCGAAGT GTTGGTTATC GCTGACAGCG GTGCCACACC AGCGTTCGTC GCCTCCGACC TATTGTCACA GGCAGAGCAC GGCCCGGATT CACAGGTCAT CCTACTCACA CCTGATGCCG CCATGGCCAA AGCCGTCGCA GACGCCGTTG AAGAGCAGCT CACACACCTG TCTCGTGCCG ACATCGCACG CCAGGCGCTT GCCAGCAGCC GCGTCATTGT CGCGCGTGAT TTAGCGCAGT GTGTTGAAAT CAGCAATCAA TATGGCCCAG AGCATCTTAT CATTCAGACG CGCGATGCAA AGTCATTAGT CGACAGCATT ACCAGCGCCG GTTCCGTGTT TCTTGGCGAC TGGTCGCCGG AATCCGCTGG TGACTATGCC TCCGGCACTA ACCATGTTCT GCCGACCTAT GGCTATACCT CGACCTATTC GAGCCTGGGT TTGGCCGATT TTCAGAAGCG CATGACCGTA CAGCAGCTCA CGCCACAGGG GTTACTGCAA CTGGCACCAA CAATAGAAAC CCTGGCACAG GCCGAACAAC TGACCGCCCA CAAAAACGCC GTTACCCTAC GTGTTGCAGC ACTGAAGGAG CAAGCATGA
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Protein sequence | MADNTKSIGN FSSIVDWQRC SAEEQRQLLT RPAISASDRI TAVVSDILTN VKSRGDSALR DYSAQFDKVQ VNAIRVTDAE ITAASARLGD EVKQAMAIAV RNIETFHNAQ KLPIVDIETQ PGVRCQQITR PIATVGLYIP GGSAPLPSTV LMLGTPSRIA GCGRVVLCSP PPIADEILYA AQLCGIKEVF QLGGAQAIAA MAFGTDSVPK VDKIFGPGNA YVTEAKRQVS QQLDGAAIDM PAGPSEVLVI ADSGATPAFV ASDLLSQAEH GPDSQVILLT PDAAMAKAVA DAVEEQLTHL SRADIARQAL ASSRVIVARD LAQCVEISNQ YGPEHLIIQT RDAKSLVDSI TSAGSVFLGD WSPESAGDYA SGTNHVLPTY GYTSTYSSLG LADFQKRMTV QQLTPQGLLQ LAPTIETLAQ AEQLTAHKNA VTLRVAALKE QA
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