| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2003 |
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| Symbol | rpsA |
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| ID | 8530402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2180623 |
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| End bp | 2182320 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003259389 |
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| Protein GI | 261821283 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0183924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACCCT TAAGATTATC AAACATGACT GAATCTTTTG CTCAACTCTT TGAAGAATCC
CTGAAAGAAA TCGAAACCCG TCCTGGTTCC ATCGTGCGCG GTGTTGTTGT TGCTATTGAC
AAAGATGTCG TACTGGTTGA CGCCGGTCTG AAATCTGAAT CTGCCATTCC GGTAGAGCAA
TTCAAGAACG CACAGGGCGA ACTGGAAATT CAGGTTGGTG ATGAAGTTGA CGTTGCTCTG
GACGCTATCG AAGATGGCTT CGGTGAAACG CTGCTTTCTC GCGAAAAAGC TAAACGTCAT
GAAGCATGGC TGACGCTGGA AAAAGCTTAC GAAGAAGCTG CAACAGTTAC TGGTATTATC
AACGGTAAAG TTAAAGGCGG TTTCACTGTT GAGCTGAACG GCATTCGTGC GTTCCTGCCA
GGTTCTCTGG TAGACGTTCG TCCGGTTCGC GACACGCTGC ATCTGGAAGG CAAAGAGCTT
GAGTTCAAAG TTATCAAGCT GGATCAGAAA CGCAACAACG TTGTTGTTTC TCGCCGTGCA
GTTATCGAAT CTGAAAACAG CGCTGAACGC GATCAACTGC TGGAAAACCT GCAGGAAGGC
ATGGAAGTTA AAGGTATCGT TAAGAACCTT ACTGACTACG GTGCATTCGT TGATCTGGGC
GGCGTTGATG GCCTGCTGCA TATCACTGAT ATGGCTTGGA AACGTGTTAA ACACCCAAGC
GAAATCGTCA ATGTGGGCGA CGAAATCACT GTTAAAGTGC TGAAGTTTGA CCGCGAGCGT
ACTCGTGTAT CTCTGGGCCT GAAACAACTG GGCGAAGATC CATGGGTCGC TATCGCTAAG
CGTTACCCAG AAAGCACGCG TCTGACTGGC CGCGTAACTA ACCTGACCGA TTACGGCTGC
TTCGTTGAAA TCGAAGAAGG CGTTGAAGGT CTGGTACACG TTTCTGAAAT GGATTGGACC
AACAAAAACA TCCATCCGTC CAAAGTTGTT AACGTTGGCG ATGTAGTGGA AGTGATGGTT
CTGGATATCG ATGAAGAACG TCGTCGTATC TCTCTGGGCC TGAAACAGTG TAAATCCAAC
CCATGGCAGT TGTTCGCAGA AACCCACAAC AAGGGCGACC GCGTTGAAGG TAAAATCAAG
TCTATCACTG ACTTCGGTAT CTTCATTGGT CTGGACGGCG GCATCGACGG TCTGGTACAC
CTGTCCGACA TCTCTTGGAA CGTGGTTGGT GAAGAAGCCG TTCGCGAATA CAAGAAAGGT
GATGAAATCG CCGCTGTTGT TCTGCAAGTT GACGCAGAGC GCGAGCGTAT CTCTCTGGGC
GTGAAACAAC TGGCTGAAGA CCCGTTCAAT AACTACCTGT CTGTTAACAA GAAAGGTGCT
ATTGTTACTG GTAAAGTTAC AGCGGTTGAC GCCAAAGGTG CTACAGTTGA ATTAGCGGAT
GGTGTAGAAG GCTACCTGCG TGCTTCTGAA GCCTCTCGCG ATCGCATTGA AGACGCAACG
CTGGTACTGA ACGTTGGTGA CAGCGTTGAA GCGAAATACA CCGGTGTTGA TCGTAAAAAC
CGCGTTGTTA GCCTGTCTGT TCGTGCGAAA GACGAAGCTG ATGAGAAAGA TGCAATCGCA
ACTGTTAACA ACAAGCCGGA AGAAAACAAT TTCTCCAGCG CGATGGCAGA AGCATTCAAA
GCAGCTAAAG GCGAGTAA
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| Protein sequence | MKPLRLSNMT ESFAQLFEES LKEIETRPGS IVRGVVVAID KDVVLVDAGL KSESAIPVEQ
FKNAQGELEI QVGDEVDVAL DAIEDGFGET LLSREKAKRH EAWLTLEKAY EEAATVTGII
NGKVKGGFTV ELNGIRAFLP GSLVDVRPVR DTLHLEGKEL EFKVIKLDQK RNNVVVSRRA
VIESENSAER DQLLENLQEG MEVKGIVKNL TDYGAFVDLG GVDGLLHITD MAWKRVKHPS
EIVNVGDEIT VKVLKFDRER TRVSLGLKQL GEDPWVAIAK RYPESTRLTG RVTNLTDYGC
FVEIEEGVEG LVHVSEMDWT NKNIHPSKVV NVGDVVEVMV LDIDEERRRI SLGLKQCKSN
PWQLFAETHN KGDRVEGKIK SITDFGIFIG LDGGIDGLVH LSDISWNVVG EEAVREYKKG
DEIAAVVLQV DAERERISLG VKQLAEDPFN NYLSVNKKGA IVTGKVTAVD AKGATVELAD
GVEGYLRASE ASRDRIEDAT LVLNVGDSVE AKYTGVDRKN RVVSLSVRAK DEADEKDAIA
TVNNKPEENN FSSAMAEAFK AAKGE
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