| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2000 |
|---|
| Symbol | |
|---|
| ID | 8530399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2177186 |
|---|
| End bp | 2178271 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_003259386 |
|---|
| Protein GI | 261821280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.572206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGA TTTTTAATTT TAGCGCCGGT CCAGCAATGC TGCCGGTTGA AGTACTGCGT
CGCGCTGAAC AGGAATTATG TAATTGGAAT GGCTTGGGTA CATCGGTCAT GGAAATCAGC
CACCGTAGTA AAGAGTTTAT GCAGGTCGCT GCTGAATCCG AACAGGATCT GCGAGACTTG
CTGAAAGTCC CCTCCAACTA CAAAGTGCTC TTTTGCCATG GCGGTGCTCG TGCGCAATTT
GCCGCCGTGC CGTTAAATCT CTTGGGCGAG CGTTCAACGG CGGACTACAT CGACGGCGGA
TATTGGGCGC ATAGCGCAAT CAATGAAGCA GAAAAATACT GCACGCCAAA CGTGATTGAC
GTGAAAACGC GCGTAGGCGA TCTGCGCGGC ATTAAGCCGA TGCGTGAATG GCAATTGTCT
GATGATGCTG CGTTTGTACA CTATTGTCCG AATGAGACCA TTGACGGTGT TGCGATCGAA
GAAGAGCCCG ATTTCGGCGA TAAAATTGTG GTTGCCGACT ATTCTTCCAG CATTTTGTCT
AGCCGCATTG ACGTCAGCCG TTACGGCGTG ATCTATGCTG GTGCGCAGAA AAATATCGGC
CCCGCGGGTT TGACGCTGGT TATAGTGCGT GAAGATTTGC TGGGTAAAGC ACGCCGCGAA
CTGCCATCGA TTCTGGATTA CAAGATTCTG GCGGACAATG ACTCCATGTT TAACACACCG
CCGACCTTTG CCTGGTATCT GTCTGGCATG GTCTTCAAAT GGCTGAAAGA GCAGGGCGGT
TTGGCTGAAA TGGAAAAGCG TAACCAAGAT AAAGCTGACC TGTTGTATAG CGCGATTGAC
GGTAGCGACT TCTATCGTAA CGATGTCGCG GTGGCAAACC GCTCTCGTAT GAACGTACCA
TTCCTGTTGG CGGATTCTGC GCTGGATAAA GTCTTTCTGG ACGAGTCTGT TGCCGTTGGC
CTGCACGCAC TGAAAGGCCA TCGTGTTGTA GGCGGCATGC GTGCCTCCAT CTACAATGCC
ATGCCGTTGG AAGGCGTGAA AGCGCTGACT GAATTTATGG CCGACTTCGC ACGTCGCCAC
GGTTGA
|
|---|
| Protein sequence | MTQIFNFSAG PAMLPVEVLR RAEQELCNWN GLGTSVMEIS HRSKEFMQVA AESEQDLRDL
LKVPSNYKVL FCHGGARAQF AAVPLNLLGE RSTADYIDGG YWAHSAINEA EKYCTPNVID
VKTRVGDLRG IKPMREWQLS DDAAFVHYCP NETIDGVAIE EEPDFGDKIV VADYSSSILS
SRIDVSRYGV IYAGAQKNIG PAGLTLVIVR EDLLGKARRE LPSILDYKIL ADNDSMFNTP
PTFAWYLSGM VFKWLKEQGG LAEMEKRNQD KADLLYSAID GSDFYRNDVA VANRSRMNVP
FLLADSALDK VFLDESVAVG LHALKGHRVV GGMRASIYNA MPLEGVKALT EFMADFARRH
G
|
|---|
| |