Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1991 |
Symbol | |
ID | 8530390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2163909 |
End bp | 2165063 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | putative MFS family transporter protein |
Protein accession | YP_003259377 |
Protein GI | 261821271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTT ATTCCCGCCC AGTGCTGTTA TTGCTCTGCG GACTTCTGCT GCTGACGGTT TGTATTGCGG TATTAAATAC ACTGGTTCCA CTTTGGTTGA GTTATCAGGC TCTGCCCGTC TGGCAGGTGG GCCTGGTTGG CTCATCCTAT TTCGCTGGCA ATCTGATTGG AACGCTATTC GCCGGCAAAT TAATCAAACT TTATGGGTTT AACCGCAGCT ATTATTTCGC AGCTTTATTA TTTAGCGTTG CGATTGTGGG GCTTGGCATT TCTGCGGATA TTGGCAACTG GTTATTCTGG CGTTTTCTTG CCGGGATTGG TTGTGCATTG ATCTGGGTTG TGGTCGAAAG TGCCTTGTTG TGCAGTGGAA CATCTGCACA GAGAGGGCAA CTACTGGCTG CTTATATGAT CGCTTATTAC CTCGGCAGTG TGATTGGACA ACTGTTGCTT AGCGTGTTGC CTACGTCATT ATTGAGCGTG CTGCCGTGGA TGGCTGCATT AGTTATTTTA GCGGTATTAC CGCTGTTGTT TACTCGTCTC CCCGCTCCGC CAAAACAGCA TGAAAAACCT GTCAATATGT GGAAAATGCT GTCGTATCGC AGTGCACGTT TAGGCATACA CGGTTGTATT ATTTCCGGCG CAATTTTAGG CTCATTGTAT GGCCTGATGC CGCTGTATCT TTCCCATCAG GGAATGAATG ATGCACAGGT TGGATACTGG ATGGCGCTGT TAATCAGCTC CGGTATCATC GGTCAATGGC CTGTTGGGCG ACTGGCGGAT CGCTATGGTC GATTGTTGGT TCTACGGGTG CTGGTTTTTG TGGTGATTGT GGGTTGCATT GCCATGCTAA GTATCAGCCA CTATGCGATG GCTCCGTCGC TGTTCCTGCT GGGATGCGCG GGGTTTACGC TGTACCCCGT TGCCATGTCG TGGGCATGCG AAAAAGTGAG CCCTGATGAA CTCGTGGCCA TGAACCAAGC GCTGCTCCTC AGCTACACGC TTGGCAGCCT TTGTGGGCCA AGCGTTGCTG CAGTATTGAT GCAAAGCTAC TCCGATCGGT TGCTGTTTGT TCTGATTGCA GCTATTGCCA TGATCTACCT GATGCTGTTG CTCAGAAAAG TCAATCACCA TCCAACGCCG TTAGCTACTG CTTGA
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Protein sequence | MSAYSRPVLL LLCGLLLLTV CIAVLNTLVP LWLSYQALPV WQVGLVGSSY FAGNLIGTLF AGKLIKLYGF NRSYYFAALL FSVAIVGLGI SADIGNWLFW RFLAGIGCAL IWVVVESALL CSGTSAQRGQ LLAAYMIAYY LGSVIGQLLL SVLPTSLLSV LPWMAALVIL AVLPLLFTRL PAPPKQHEKP VNMWKMLSYR SARLGIHGCI ISGAILGSLY GLMPLYLSHQ GMNDAQVGYW MALLISSGII GQWPVGRLAD RYGRLLVLRV LVFVVIVGCI AMLSISHYAM APSLFLLGCA GFTLYPVAMS WACEKVSPDE LVAMNQALLL SYTLGSLCGP SVAAVLMQSY SDRLLFVLIA AIAMIYLMLL LRKVNHHPTP LATA
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