| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1978 |
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| Symbol | clpA |
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| ID | 8530377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2146225 |
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| End bp | 2148498 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_003259364 |
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| Protein GI | 261821258 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATC AAGAACTGGA ACTCAGTCTC AACATGGCTT TCGCCAGAGC GCGTGAGCAC
CGACACGAGT TTATGACCGT GGAGCACCTG TTGCTGGCTC TGCTCAGTAA TCCGGCCGCG
CGTGAAGCGT TGGAGGCCTG TACGGTAGAT TTAGCCGCAC TGCGCCAGGA ACTGGAAGCC
TTCATTGAAC AGACCACACC AACATTACCG CAGAGTGACG ATGAGCGAGA GACTCAGCCG
ACGCTCAGCT TCCAGCGCGT ATTGCAACGC GCCGTCTTTC ATGTGCAGTC TTCTGGCCGC
AGCGAAGTGT CTGGTGCCAA CGTTCTGGTT GCCATTTTTA GCGAACAGGA ATCTCAGGCC
GCCTATTTGC TGCGCAAGCA TGACGTTAGC CGTCTGGATG TTGTGAACTT TATTTCTCAC
GGTACGCGTA AAGAAGAAAC CGATCAGGCA CCGAACCCTG AAAGTCCCGT CAATGAAGAG
CAGGCAGGAG GGGAAGATCG TATGGAAAAC TTCACCACCA ATCTGAATCA ACTGGCTCGC
GTTGGCGGTA TCGATCCGCT CATTGGCCGG GAGAAAGAAC TGGAGCGCAC GATTCAGGTA
TTATGCCGCC GCCGTAAGAA TAACCCGCTG CTGGTCGGTG AATCCGGCGT GGGTAAAACC
GCGATTGCAG AGGGGCTGGC CTGGCGTATT GTGCAAGGTG ATGTACCGGA AGTGATGGCG
GAATGCACTC TGTATTCGCT GGACATTGGT GCGTTGCTGG CAGGCACCAA ATATCGCGGT
GACTTTGAAA AACGATTCAA GGCGCTGTTG AAACAACTGG AACAGGATAA AAATAGCATC
CTGTTCATTG ATGAGATCCA CACAATTATT GGTGCGGGCG CCGCATCAGG TGGTCAGGTG
GATGCCGCAA ACCTGATTAA ACCGCTACTC TCCAGCGGCA GGATCCGCGT CATTGGATCC
ACTACCTATC AGGAGTTCAG CAATATCTTT GAAAAGGATC GGGCGCTGGC GCGTCGTTTC
CAAAAAATCG ATATCACTGA ACCCAGCGTG GAAGAAACCA TACAAATCAT CAATGGCCTG
AAGCCGAAAT ATGAGTCTCA CCATGATGTC CGCTATACCT CAAAAGCCGT TCGTGCTGCG
GTAGAGCTGG CGGTGAAATA TATCAATGAC CGCCATTTGC CGGATAAAGC CATCGATGTG
ATTGATGAAG CAGGTGCGCG TAGCCGTCTG ATGCCAGCCA GCAAACGTAA GAAAACGGTC
AACGTGAGCG ATATCGAATC GGTCGTCGCC CGCATCGCCC GTATTCCAGA GAAAACGGTT
TCTGCCAGCG ATCGTGACGT GCTGAAAAAT CTCAGCGATC GCCTGAAAAT GCTGGTGTTT
GGACAGGATA AAGCAATTGA AGCGCTGTCT GAGTCTATCA AAATGAGCCG TGCAGGGTTA
GGCCAGGAGC GTAAGCCGGT AGGGTCCTTC CTGTTCGCGG GCCCTACGGG TGTCGGTAAG
ACGGAAGTGA CGCTGCAACT GGCGAAGGCG CTGGATATTG AGCTGCTGCG CTTTGATATG
TCCGAATACA TGGAGCGTCA TACCGTCAGT CGCCTGATTG GTGCGCCTCC AGGTTATGTT
GGCTACGATC AGGGCGGTCT GCTGACGGAT GCGGTGATCA AGCATCCTCA TGCGGTGCTG
CTGCTGGATG AGATCGAGAA AGCGCACCCT GACGTCTTTA ACCTGCTGTT GCAGGTGATG
GATAACGGTA CGCTGACGGA CAACAATGGT CGCAAAGCGG ATTTCCGCAA TGTCATTGTT
GTTATGACGA CCAATGCGGG CGTGCGGGAA ACACAGCGTA AGTCCATCGG TATCATCCAT
CAGGACAACA GTACGGATGC GATGGAAGAG ATCAAGAAGG TGTTTACGCC GGAATTCCGT
AACCGTCTGG ATGGAATTAT CTGGTTCAAC CACCTATCGA CCGACGTTAT CCAGCAGGTT
GTCGATAAAT TTATCGTTGA ACTTCAGGCG CAGTTGGATG CGAAAGGCGT ATCACTGGAA
GTCAGTGATG AAGCGCGAGA TTGGCTGGCC GAGAAAGGCT ATGACAAAGC GATGGGTGCC
CGGCCAATGG CGCGCGTGAT GCAGGAAAGC CTCAAGAAAC CGCTGGCCAA CGAGCTGCTG
TTTGGTTCGC TGGTGGATGG GGGTTCTGTT ACGGTGGAAT TGGATAAAGA AGCGCAACAG
TTGACGTATG GCTTCCAGAG TGCGCAGAAA CGTAAAGCGG AAAGCGTTAA TTAA
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| Protein sequence | MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPAA REALEACTVD LAALRQELEA
FIEQTTPTLP QSDDERETQP TLSFQRVLQR AVFHVQSSGR SEVSGANVLV AIFSEQESQA
AYLLRKHDVS RLDVVNFISH GTRKEETDQA PNPESPVNEE QAGGEDRMEN FTTNLNQLAR
VGGIDPLIGR EKELERTIQV LCRRRKNNPL LVGESGVGKT AIAEGLAWRI VQGDVPEVMA
ECTLYSLDIG ALLAGTKYRG DFEKRFKALL KQLEQDKNSI LFIDEIHTII GAGAASGGQV
DAANLIKPLL SSGRIRVIGS TTYQEFSNIF EKDRALARRF QKIDITEPSV EETIQIINGL
KPKYESHHDV RYTSKAVRAA VELAVKYIND RHLPDKAIDV IDEAGARSRL MPASKRKKTV
NVSDIESVVA RIARIPEKTV SASDRDVLKN LSDRLKMLVF GQDKAIEALS ESIKMSRAGL
GQERKPVGSF LFAGPTGVGK TEVTLQLAKA LDIELLRFDM SEYMERHTVS RLIGAPPGYV
GYDQGGLLTD AVIKHPHAVL LLDEIEKAHP DVFNLLLQVM DNGTLTDNNG RKADFRNVIV
VMTTNAGVRE TQRKSIGIIH QDNSTDAMEE IKKVFTPEFR NRLDGIIWFN HLSTDVIQQV
VDKFIVELQA QLDAKGVSLE VSDEARDWLA EKGYDKAMGA RPMARVMQES LKKPLANELL
FGSLVDGGSV TVELDKEAQQ LTYGFQSAQK RKAESVN
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