Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1955 |
Symbol | |
ID | 8530354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2122897 |
End bp | 2123616 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | nitroreductase A |
Protein accession | YP_003259341 |
Protein GI | 261821235 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.45348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACCGA CCATTGATTT GCTACAACGC CACCGTTCTA TTCGTGCGTT TACGTCTCAG GCCGTGACGG ATGAACAACG CCACGCCATC ATTACTTCCG CACAGAGCGC GTCCAGCTCC AGCTTTTTAC AATGCAGTAC GATTATCCGC ATTACCGACC CTGTCGTGCG CGAAAAGCTG GTTCACTATA CTGGCGAGCA AGGTTATGTG GCTCAGGCCG CGGAATTTTG GGTCTTCTGT GCCGATTTTC ATCGGCATGT GGAGATCTTC CCACAGGCAG AAACCGGGCT GGCCGAGCAA TTGCTGATTG GCTGTGTCGA TACCGCTATT ATGGCGCAGA ATGCACTGGT CGCTGCTGAA TCGCTAGGAC TCGGTGGCGT TTTTATCGGT GGGATCCGCA ATCGCATTGC TGACGTGACG CAGTTACTGC AATTGCCGAC GCAGGTGATA CCGCTGTTTG GCTTGTGTCT GGGGCACCCG GATGCCGAAC CGTTGCTGAA ACCGCGCATG CCAACAGCCA TGATGCTGCA TGAGAATGTT TATCAGCCGC TCGATCGCGA TGTGTTGGCA CAATACGATA AGCAAATGGT GGAATATTAC CTGCAGCGCA CCGGTCGCCG TCGTGAAAGC TGGAGTGAAC ACGTTGAACT GACGCTGAAA AAAGAGTTAC GCCCATTCAT GCTGGACTAC TTACATCAAC AAGGATGGGC GATACGCTAG
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Protein sequence | MTPTIDLLQR HRSIRAFTSQ AVTDEQRHAI ITSAQSASSS SFLQCSTIIR ITDPVVREKL VHYTGEQGYV AQAAEFWVFC ADFHRHVEIF PQAETGLAEQ LLIGCVDTAI MAQNALVAAE SLGLGGVFIG GIRNRIADVT QLLQLPTQVI PLFGLCLGHP DAEPLLKPRM PTAMMLHENV YQPLDRDVLA QYDKQMVEYY LQRTGRRRES WSEHVELTLK KELRPFMLDY LHQQGWAIR
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