Gene Pecwa_1955 details

Gene Information

• Locus tag: Pecwa_1955
• ID: 8530354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2122897
• End bp: 2123616
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 53%
• Product: nitroreductase A
• Protein accession: YP_003259341
• Protein GI: 261821235

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.45348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACCGA CCATTGATTT GCTACAACGC CACCGTTCTA TTCGTGCGTT TACGTCTCAG 
GCCGTGACGG ATGAACAACG CCACGCCATC ATTACTTCCG CACAGAGCGC GTCCAGCTCC 
AGCTTTTTAC AATGCAGTAC GATTATCCGC ATTACCGACC CTGTCGTGCG CGAAAAGCTG 
GTTCACTATA CTGGCGAGCA AGGTTATGTG GCTCAGGCCG CGGAATTTTG GGTCTTCTGT 
GCCGATTTTC ATCGGCATGT GGAGATCTTC CCACAGGCAG AAACCGGGCT GGCCGAGCAA 
TTGCTGATTG GCTGTGTCGA TACCGCTATT ATGGCGCAGA ATGCACTGGT CGCTGCTGAA 
TCGCTAGGAC TCGGTGGCGT TTTTATCGGT GGGATCCGCA ATCGCATTGC TGACGTGACG 
CAGTTACTGC AATTGCCGAC GCAGGTGATA CCGCTGTTTG GCTTGTGTCT GGGGCACCCG 
GATGCCGAAC CGTTGCTGAA ACCGCGCATG CCAACAGCCA TGATGCTGCA TGAGAATGTT 
TATCAGCCGC TCGATCGCGA TGTGTTGGCA CAATACGATA AGCAAATGGT GGAATATTAC 
CTGCAGCGCA CCGGTCGCCG TCGTGAAAGC TGGAGTGAAC ACGTTGAACT GACGCTGAAA 
AAAGAGTTAC GCCCATTCAT GCTGGACTAC TTACATCAAC AAGGATGGGC GATACGCTAG 

 

Protein sequence

MTPTIDLLQR HRSIRAFTSQ AVTDEQRHAI ITSAQSASSS SFLQCSTIIR ITDPVVREKL 
VHYTGEQGYV AQAAEFWVFC ADFHRHVEIF PQAETGLAEQ LLIGCVDTAI MAQNALVAAE 
SLGLGGVFIG GIRNRIADVT QLLQLPTQVI PLFGLCLGHP DAEPLLKPRM PTAMMLHENV 
YQPLDRDVLA QYDKQMVEYY LQRTGRRRES WSEHVELTLK KELRPFMLDY LHQQGWAIR