| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1947 |
|---|
| Symbol | |
|---|
| ID | 8530346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2114918 |
|---|
| End bp | 2115763 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_003259334 |
|---|
| Protein GI | 261821228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0195424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA CGCATTCTGT TCGCGCCGTT CTGGGCATCA CTCTGCTTGC CGCCGGTATG
CAACTTGCTG TGGCGAGCAG CGATCCGCAG ACGATCACGT TTGGCGTGGC ACCAGGGCCT
TATGGTGACA TGGTAAACCT GGCGATCAAA CCTGAGCTGG TGAAAAAAGG CTATAAGGTC
GTGGTGCGTG AATTCAGCGA TTACGTTCAG CCCAATCTGG CACTGGCCAA CGGCAGCATC
GATGCTAACC TTTTCCAGCA TACGCTCTAT TTAGAAAAAT TTGCCGCCGA TAAAGGGTTA
AAAATTTCTC CGCTGATTAT CGTACCGACG GCCAGCATGG GTTTCTATTC GAAGAAAATC
ACATCGCTGG ATGCGCTGAA AAAAGGGGAT GTGGTCACGC TCTCTAACGA TGCCACCAAT
CTGGCGCGCG GCCTGCGTTT CCTGCAATCG ATAGGGCTGG TTACGATTAA GGCCGATATC
GATCCGACCA AGGCTTCTGA AAAAGATATT CTTGAAAATC CACGCGGGCT GGTCTTCAAA
CCGATGGAAG CGGCGCAATT GCCGCGTACT CTGGATAGCG TGACGGCATC GCTGGTGAAC
GGTAATTTCG CACTGGCATC CGGCATGAAA CTGTCGTCGG CCATCAAGCT GGAAACGCTG
GACGAGAACC TGAAAAACAT TATTGCCGTG CGCACCGACG ATCTCGATAA ACCATTCGTT
AAAGACACCA AAGCGATTGT GGAGTCACCC GCGTATGCTG CGGTGATCAA CGATCCTGCA
TTGATGTATA GCCAATTCCA GAAGCCTGAG TGGATGCAGG CGAAAACGCC AGCGCCCGCC
CAGTAA
|
|---|
| Protein sequence | MKLTHSVRAV LGITLLAAGM QLAVASSDPQ TITFGVAPGP YGDMVNLAIK PELVKKGYKV
VVREFSDYVQ PNLALANGSI DANLFQHTLY LEKFAADKGL KISPLIIVPT ASMGFYSKKI
TSLDALKKGD VVTLSNDATN LARGLRFLQS IGLVTIKADI DPTKASEKDI LENPRGLVFK
PMEAAQLPRT LDSVTASLVN GNFALASGMK LSSAIKLETL DENLKNIIAV RTDDLDKPFV
KDTKAIVESP AYAAVINDPA LMYSQFQKPE WMQAKTPAPA Q
|
|---|
| |