Gene Pecwa_1943 details

Gene Information

• Locus tag: Pecwa_1943
• ID: 8530342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2110462
• End bp: 2111241
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 52%
• Product: hypothetical protein
• Protein accession: YP_003259330
• Protein GI: 261821224

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.16005
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAAAC GCCTGATATT TGGTTTGTTA GCTCTCATTA GCGTGCTGCT GCTTTCCGCT 
TTTGCGCTCG ATCGCTGGAT TAGTTGGAAA ACGGCGCCAT TCATTTACGA TGAGCTTCAA 
ACTTTGCCGA AACGTCAGGT CGGCGTGGTA TTGGGAACGG CAAAGTACTA TCGTACCGGT 
ATGCTTAATC AGTATTACCA GTTTCGTATG CAGGGGACAA TTAACGCTTA TAACAGCGGT 
AAAGTCAGCT ATCTGCTATT AAGCGGTGAT AACGCGCTGC AAAGCTACAA TGAGCCGATG 
ACGATGCGCC GCGATTTGAT CGCCGCAGGC GTACCACCTT CAGATATCGT GTTGGACTAT 
GCTGGCTTCC GCACGCTGGA TTCCATCGTC AGAACGCGCA AGGTGTTCGA TACCAACGAT 
TTCACCATCA TCACCCAGCG CTTTCACTGT GAGCGTGCGT TATTCATCGC GCTGCACCTC 
GGTATTCAGG CACAGTGTTA CGCGGTGCCT TCCCCCAAAA ATATGATGAT CGTGCGGATT 
CGTGAATTTG GCGCTCGCTT GGGTGCACTA TTCGATCTGT ATGTTCTCAA ACGCGAGCCA 
CGTTTTTTAG GACCGCAGGT GCCGATTCCA GCAGAGCATA CTATTCCCGA AGATGCGCCA 
GATTACCCTG CCGTCCTGCC GGAACAGGTA CTGACCTCGC CAGTTAATCA GCCTAAACCT 
GGCCAACCAA CGGGTATAAC ACCTGAACCC GCACCACAAA GCGAGCAAGC CGCACCCTAG 

 

Protein sequence

MWKRLIFGLL ALISVLLLSA FALDRWISWK TAPFIYDELQ TLPKRQVGVV LGTAKYYRTG 
MLNQYYQFRM QGTINAYNSG KVSYLLLSGD NALQSYNEPM TMRRDLIAAG VPPSDIVLDY 
AGFRTLDSIV RTRKVFDTND FTIITQRFHC ERALFIALHL GIQAQCYAVP SPKNMMIVRI 
REFGARLGAL FDLYVLKREP RFLGPQVPIP AEHTIPEDAP DYPAVLPEQV LTSPVNQPKP 
GQPTGITPEP APQSEQAAP