| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1939 |
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| Symbol | |
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| ID | 8530338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2104886 |
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| End bp | 2105758 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003259326 |
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| Protein GI | 261821220 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.514267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGA CCCAGCTCCG TATGTTCTGT CTCGTCGCCG AAACAGGCTC CGTCGCGCGT
GCCGCAGAGC AGCTTCATCG GGTGCCCTCA AATCTGACCA CGCGGCTACG CCAGTTAGAG
CTGGAGTTGG GCACCGATCT GTTTATCCGT GAGAAACAGC GTCTGCGTTT GTCCCCGATT
GGGCACAATT TCTTATGCTA TGCACAACGC ATTCTGGCGC TCAGCGAGGA AGCCATCAGC
ATGACGCGCA CTGGCGAGCC CGCGGGTAAT TTCGCGCTAG GTTCGACAGA AAGTACGGCG
GCGACCCGCT TGCCTACGTT ATTAGCGGCT TATCATCAAC GTTACCCCAA TGTCTCTTTG
TCCCTGAATA CTGGAACATC AGGGGAAATT ATCGAGCGCG TGCGTGCGGG AACGCTGGCA
GCAGCACTCG TCGATGGCCC TGTTGTCTAT GATGAGCTAA ATGGGTGTTC ATGTTTTGCG
GAACGATTAG TGCTGATATC CGACCCTGCA CACTCGCCGA TTACCCATGC GCGGGATGCC
AGCCAGGATA CATTGTTTGC CTTTCGTCCT GGCAGCTCTT ATAGAAAGCG CCTCGAAAAT
TGGTTCAGAC AAGATGGCAT CGTGCCCGGT ACTATCATGG AAATTCACTC ATACCACGCC
ATGCTTGCCT GTGTAAGCAG CGGAGCCGGG CTAGCCATGC TCCCCCATAC AGTCCTTGAA
TCGCTGCCCG CGGGTACACG CGTTCAGGTG CATGAATTAC CTCCCGACAT CGCGATCGTT
TCCACCTGGT TGGTATGGCG GCGCGATGCT TTCGGCCCCA ATGTTGAGGC ATTAAAAAAG
CTCATTATTG AGCAATCCTC TCAGCAGGAA TAA
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| Protein sequence | MDLTQLRMFC LVAETGSVAR AAEQLHRVPS NLTTRLRQLE LELGTDLFIR EKQRLRLSPI
GHNFLCYAQR ILALSEEAIS MTRTGEPAGN FALGSTESTA ATRLPTLLAA YHQRYPNVSL
SLNTGTSGEI IERVRAGTLA AALVDGPVVY DELNGCSCFA ERLVLISDPA HSPITHARDA
SQDTLFAFRP GSSYRKRLEN WFRQDGIVPG TIMEIHSYHA MLACVSSGAG LAMLPHTVLE
SLPAGTRVQV HELPPDIAIV STWLVWRRDA FGPNVEALKK LIIEQSSQQE
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