Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1917 |
Symbol | spr |
ID | 8530316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2080377 |
End bp | 2080958 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | putative outer membrane lipoprotein |
Protein accession | YP_003259304 |
Protein GI | 261821198 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGT CTCAACCGAT TCTGAGATAT ATCTGGCGGG CAGTGCCTGC CGTCGCGGTC GCAATGATGC TCTCCGCGTG TGGAAGTAAT AGTGCATACA ACCATAAAGC TCAAACTGAT ATGCATGCAG TTAATGATAA AGATGGTCTT TTACTGCAAG CCTCTCAGGA TGAATTTGAA GCACTGGTTC GTAACGTGGA TATCAAGTCC AAATTACTTA ACCAATATGC CAGTTGGAAA GGTGTTACTT ACCGTTTAGG CGGTGATAGT CGCCGTGGCA TTGACTGCTC AGCTTTCGTT CAGCGCACGT TCCGCGAACA GTTTGGTATG GATTTACCGC GTTCAACCTA TGAACAGCAA GAGATAGGCC AGAAAATTCA GCGCAACAAA CTGCGCGTTG GCGATCTTGT CCTGTTCCGT GCGGGTTCAA CCGGACGCCA CGTTGGCATT TATCTCGGCA ACGATCAGTT CGTCCACGCC TCCACCAGCA GTGGCGTCAT CATCTCCAAA ATGACGGAAG ACTACTGGAA TAAGCGTTAT CAAGAAGGAC GCCGTGTCCT GAATAAAGGA AAAACCAGCT AA
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Protein sequence | MVKSQPILRY IWRAVPAVAV AMMLSACGSN SAYNHKAQTD MHAVNDKDGL LLQASQDEFE ALVRNVDIKS KLLNQYASWK GVTYRLGGDS RRGIDCSAFV QRTFREQFGM DLPRSTYEQQ EIGQKIQRNK LRVGDLVLFR AGSTGRHVGI YLGNDQFVHA STSSGVIISK MTEDYWNKRY QEGRRVLNKG KTS
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