Gene Pecwa_1910 details

Gene Information

• Locus tag: Pecwa_1910
• ID: 8530309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2071764
• End bp: 2072459
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 51%
• Product: 16S rRNA pseudouridylate synthase A
• Protein accession: YP_003259297
• Protein GI: 261821191

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.800741
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTGG ACAAATTTTT ATCCCAACAG TTGGAAATTA GCCGTTCACT GGTGGCGCGT 
GAGCTCCACG CACAGCGCGT TACCGTCGAT GGTGAAGTGG TAAAAAGCGG CGCATTCAAG 
TTATCCCCGG AGCATAACGT TGAATTTGAT GGCAACCCAC TGAAACAGCA GAGCGGCCCA 
CGTTATTTCA TGTTGAATAA GCCTCAGGGC TACGTTTGTT CAACGGACGA TCCCGATCAT 
CCTACCATTC TGTATTTTAT GGATGTGCCA GTAGCGTACA AACTGCATGC GGCAGGGCGG 
CTGGATATCG ATACCACGGG GTTGGTGCTG TTAACTGACG ATGGTCAATG GTCGCATCGT 
ATTACCTCAC CTAAACATGA GTGTGAAAAA ACGTATTTGG TGACGCTGGA ACAGCCGCTG 
GCCGAGGATA CCGCTGCGCA ATTTACGGCA GGCGTACAGT TGCATAGCGA GAAGAATCTC 
ACTAAGCCCG CCTCGCTTGA GAAGGTAACG GATTATGTCG TGCGGTTGAC GATTAGCGAA 
GGTCGCTATC ATCAGGTGAA AAGGATGTTT GCTGCGGTGG GGAATCGCGT CGTTGAGCTG 
CATCGCGAGC GTATTGGCGG CATTTCTCTG GATAGCGAAC TGGAACCGGG AGAATACCGC 
GAGTTGAGTG CTGAAGAGGT AGCCAGCGTA AAATAA 

 

Protein sequence

MRLDKFLSQQ LEISRSLVAR ELHAQRVTVD GEVVKSGAFK LSPEHNVEFD GNPLKQQSGP 
RYFMLNKPQG YVCSTDDPDH PTILYFMDVP VAYKLHAAGR LDIDTTGLVL LTDDGQWSHR 
ITSPKHECEK TYLVTLEQPL AEDTAAQFTA GVQLHSEKNL TKPASLEKVT DYVVRLTISE 
GRYHQVKRMF AAVGNRVVEL HRERIGGISL DSELEPGEYR ELSAEEVASV K