Gene Pecwa_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1896 
Symbol 
ID8530294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp2055744 
End bp2057012 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content46% 
IMG OID 
Productflagellin domain protein 
Protein accessionYP_003259284 
Protein GI261821178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA TCAATACTAA CAGCCTGTCT CTGACAGCTC AAAACAACCT GAATAAATCT 
CAGTCTGCAC TGGGTACAGC TATCGAGCGT CTGTCTTCTG GCTTCCGTAT CAACAGTGCT
AAAGACGATG CTGCGGGTCA GGCTATCGCT AACCGCTTCA CCGCTAACAT TAAAGGCCTG
ACTCAGGCTG CACGTAATGC TAACGATGGT ATCTCTGTTG CACAGACTAC TGAAGGTGCG
TTGAACGAAA TCAACAACAA CTTGCAGCGT ATCCGTGAAC TGACAGTGCA GGCCGCTAAC
GGATCTAACC AAGATGTTGA CCTGGATTCA GTTCAGGGTG AAATCCAACA GCGTTTAGAT
GAAATTGACC GCGTATCTTC ACAAACGCAG TTCAACGGCG TGAAAGTATT GGCTAGCGAC
CAAGGGTTGA AAATCCAGGT TGGTGCTAAC GATAACGAAA CGATCACGAT CAATCTTCAG
GAAATTACCA GCTCAACATT AGGTTTAGGT GGATTCTCTG TATCTGCAAG CACTCCTAAA
TTAAGTGATT CAGTCACTCA ACTTGGTGAT GGCACAGGCG CACCTACAGC CCCTAATTTT
ACTGATGCGC TAGCTTCACT TAACACTGGA CTTGGTCTGA CTGGCGATAA AGCGCTTACA
GCTAAGGATG TTACTCTTCA TAACGTATTA GATGCCAACG GTGCTGGTAC TGCTCAATAT
GCTCTGAAAG TAGGTAACGA TGTGTATGCA GCTAAGGTTA CTGCTGGCGC TGTAGATGTT
GTGAAAAGTA CCACTACTGT TACAGATAAT ACATTGGGCG GTGGAGCAAC GACTGTTACC
TTGAATGATG CTCTGGTGAA ATTAGGCGGT GATGGCACTA CTGGATATGT TTCTTACCAA
GGTAAAAACT ATCAATCAGC GGACTTGGCT GGTGGTGCTA CAACGGTAGC AGTAGGCGGT
GCAGCACCTA CCGCTACATA TGCAGCAGCT AAAACTGTAG ATCCGTTAAA AGCGCTAGAT
GCTGCACTGT CGAAAGTTGA CTCATTGCGC AGTGATTTGG GTGCGATTCA AAACCGTTTT
GAATCTACAG TAACTAACCT GAACAATACG GTAAATAACC TGACTAGCGC TCGTAGCCGT
ATCCAGGATG CTGATATTGC AACTGAAGTG TCTAACATGA GCAAAAACCA GATCCTGCAA
CAGGCTGGTA CTTCTGTGTT GGCACAGGCT AACCAGGTTC CACAGACCGT TCTGTCTCTG
CTGCGTTAA
 
Protein sequence
MAVINTNSLS LTAQNNLNKS QSALGTAIER LSSGFRINSA KDDAAGQAIA NRFTANIKGL 
TQAARNANDG ISVAQTTEGA LNEINNNLQR IRELTVQAAN GSNQDVDLDS VQGEIQQRLD
EIDRVSSQTQ FNGVKVLASD QGLKIQVGAN DNETITINLQ EITSSTLGLG GFSVSASTPK
LSDSVTQLGD GTGAPTAPNF TDALASLNTG LGLTGDKALT AKDVTLHNVL DANGAGTAQY
ALKVGNDVYA AKVTAGAVDV VKSTTTVTDN TLGGGATTVT LNDALVKLGG DGTTGYVSYQ
GKNYQSADLA GGATTVAVGG AAPTATYAAA KTVDPLKALD AALSKVDSLR SDLGAIQNRF
ESTVTNLNNT VNNLTSARSR IQDADIATEV SNMSKNQILQ QAGTSVLAQA NQVPQTVLSL
LR