| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1871 |
|---|
| Symbol | flgE |
|---|
| ID | 8530269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2032772 |
|---|
| End bp | 2033989 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_003259259 |
|---|
| Protein GI | 261821153 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTT CTCAGGCGGT CAGTGGTTTA AACGCTGCAT CTAATAATCT GGATGTTATC
GGTAATAACA TCGCTAACTC AGCAACAGTG GGATTTAAAT CCGGGGCTGT CACATTTGCC
GATATGTTTG CCGGTTCTAA AGTCGGTATG GGTGTGAAGG TCGCATCGGT ATTGCAGGAT
TTCGGTAATG GTACTGTGAC GTCGTCCTCG CGGGATCTAG ACATCGCGAT TAGCGGCGGT
GGTTTTTACC GTCTGCAAGA CACCAATGGT TCTACTTATT ACAGCCGTAA TGGTCAGTTT
ATGCTGAACG GCCGTAATAT CGTCAACGCA CAAGGCATGC AGTTGACGGG TTACCCAGTT
ACGGGTACGC CGCCCGTTGT TCAAACGGGG GCCGATCCCG TACCGTTGAC TGTTCCTGAT
GGTGATATGC TGTCGCGTGC GACAACAGCA GCTACCTTGA AAGCTAACCT GAAATCTTCC
GATGCCGTTC CAACAGGCTC TTGGGCCACA ACGCCTGGTG CCGAAGGCAC CTATAACAGT
AAAACAAATC TGACGACTTA TGACAGCCAA GGGAACAAAC ATGATTTCAC GTTGTATTTT
GTCAAAACGG CAAATAATAC GTGGCAAACA TATGCCCGAG ATGGCTCTAT AACACCAGCG
GTATATCAAT CTGCTGGAAC ATTGAATTTT GAAGCGAATG GTGCTTTAAG TTCTACTGGT
GCCACTGCAC ATACACCTTT CACTATCAAT CTTACGGGAA CGAATGGTGC TGCGAATGGT
ACTTTCACTA TTGATTTAAC CGGTAGCGTG CAGCAAAACA CGGAATATAG TTACAAAAGC
CCGATTCAGA ACGGTTATGC TCCAGGGGCA CTGACCGGTT TTGCTATAAA TGACGACGGC
ACGATCGAAG GCAACTACAG CAACGGTCAG AAACAACCTC TCGGTCAGAT ACTTCTTGCT
AGTTTTGCTA ACCCAGAAGG TTTGTCACCT GAAGGTGATA ACGCATGGTC TGAAACGGCA
AGTTCTGGTC AGGCTGTTGT TGGTCTTGCG GGCACGGGAA GTTTAGGTAA GCTGATCGGC
AAATCCACCG AAAGTTCTAA CGTTGACCTA AGTAAAGAAC TGGTCAATAT GATTGTGGCG
CAGCGTAATT ACCAGTCAAA CGCGCAGACC ATCAAAACGC AGGATTCCAT TCTGCAAACG
CTGGTTAGCC TGCGTTAA
|
|---|
| Protein sequence | MGFSQAVSGL NAASNNLDVI GNNIANSATV GFKSGAVTFA DMFAGSKVGM GVKVASVLQD
FGNGTVTSSS RDLDIAISGG GFYRLQDTNG STYYSRNGQF MLNGRNIVNA QGMQLTGYPV
TGTPPVVQTG ADPVPLTVPD GDMLSRATTA ATLKANLKSS DAVPTGSWAT TPGAEGTYNS
KTNLTTYDSQ GNKHDFTLYF VKTANNTWQT YARDGSITPA VYQSAGTLNF EANGALSSTG
ATAHTPFTIN LTGTNGAANG TFTIDLTGSV QQNTEYSYKS PIQNGYAPGA LTGFAINDDG
TIEGNYSNGQ KQPLGQILLA SFANPEGLSP EGDNAWSETA SSGQAVVGLA GTGSLGKLIG
KSTESSNVDL SKELVNMIVA QRNYQSNAQT IKTQDSILQT LVSLR
|
|---|
| |