Gene Pecwa_1839 details

Gene Information

• Locus tag: Pecwa_1839
• ID: 8530237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2000347
• End bp: 2002458
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 53%
• Product: outer membrane receptor FepA
• Protein accession: YP_003259228
• Protein GI: 261821122

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.228059
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAGG CTGCCGATGA GGATGTAATG ACCGTCAAAG CCACCGCGGA ACAAGAATTA 
AAACAACAGC CCGGAGTGTC CATCATTACG GCTGAAGACA TTAAAAAAAC GCCGCCCGTT 
AACGATCTCT CTGACATTAT CCGCAAAATG CCGGGCGTGA ACCTTACAGG CAACAGCGCC 
ACGGGTGCCA GAGGCAACAA CCGCCAGATC GATCTACGTG GCATGGGACC GGAAAATACG 
CTGATCCTCA TCGATGGCCG CCCAGTCACG TCGCGTAATG CGGTTCGCTA CGCCTGGGAT 
GGCGAACGGG ATACGCGGGG CGATACCAAC TGGGTGCCTG TCGAAGACGT GGAACGTATT 
GAAGTCATAC GTGGCCCGGC GGCGGCGCGC TACGGTTCTG GTGCTGCTGG CGGCGTGGTG 
AATATCATCA CCAAACGCCC GTCCAACGTC TGGACCGGTT CACTCTCGCT GTACGGCAAT 
CAGCCGGAAA ACAGCAAAGA AGGTGCCACA CGCCGCGCCA ATATCAACCT GAGCGGCCCG 
CTGGCCGGAG ATGCACTCAC CATGCGTCTG TACGGCAATA TCAATAAAAC CGATTCCGAC 
AGTTGGGATA TCAACCGGAA CCAGAACGGT TCTGCCGCGG CCGGACGCGA AGGTGTGCGC 
AATAAAGACC TCAATACGCT GCTGTCCTGG AAACTCTCGC CACAGCAAAT TGTTGATGTT 
GAAGCCGGCT ATAGCCGTCA GGGTAATATC TATACTGGGG ATACCCAGTT CAGCGGTGGA 
GGCGCAATCC CCGAAAGTCT TGCCAAGAGC GGCGCTGAAA CCAACCGACT GTACCGCCAG 
AATTATGCCA TTACGCATAA CGGCATCTGG GATTGGGGAC AATCCAAGCT GGGCCTCGCT 
TACGATCAAA CGAATAACAC CCGGCTTGAT GAAGGATTAT TCGGCCGTTT TGAAGGGTCT 
ATCAATAGCG ATCGCTACAG TACCAGCCGT TTGAAAAACT TGCGTATTAA CAGCGAACTG 
AATATTCCGC TGGCGCTTTG GGCTGAACAA ACGCTCACGC TAGGTGCCGA GTGGAATCGT 
GAACAGTTAA ACGATCCTGC ATCAAGCAGT TACCCAGGGG ACAGCCGCGA TACCCTCCCC 
GGCACATCCG TCAATCCTTC TCAGCGCAGC AGCAAAAACA GTGCCGAACT CAGCGCACTC 
TATTTTGAAG ACAACATCGA AGTCGTACCT GGCACCAAGG TGATTCCCGG TCTGCGCTTC 
GATTATCACG ACAAATTTGG TGGCAACTAC AGCCCAAGCC TGAACATTCA GCAGGAACTA 
GGCGAGATGT TCAGCGTGAA AGCCGGTATT GCACGCGCCT TTAAAGCGCC GAACCTTTAC 
CAATCCTCTA CTGGTTATTT GCTCTATTCA CGTGGTAACG GTTGCCCATT CGGCGTGGAT 
TACGATAACG GCGGCGGCTG CTATCTGGCG GGTAATGACA ATCTGAATCC CGAAATCAGC 
GTCAACAAAG AAATCGGTCT GGAGTTCAAA CATTCCGGCT GGCAGGCGGG TGTGACCTAT 
TTCCGCAATG ACTATAAAAA CAAGATTGTT TCCGGCACCG ATATCCTCGG GCTGACGCAG 
TCAAATGCGG CGATTTTACG TTGGGAAAAT GGTGGTAAAG CGCTGGTGGA AGGACTGGAA 
GCCAACCTGC TGGTGCCAGT GGTTGCAGAC ACGCTGGACT GGAACACCAA CGCCACCTAT 
ATGATTGAAT CGAAGAATAA AGACACCGGT AATCCGCTGT CGATTATCCC GAAATACACC 
GTCAATACGA TGTTGGATTG GCAGGCGACG GATAAACTGT CCGCCAACAT CAGTTGGACC 
CTGTACGGTA AGCAGAAACC GCGCCAATAT GTGACAAACT GGACAGAGTA CAGGAACGGA 
CTTTCTTCAC GTGAAATCGG CAGCTACTCC GTTGCAGGTG TCGGAGTGAA CTACCAGTTC 
AACAAGAACC TGCGTGTCAA TGCCGGTATC AGTAACCTGT TCGACAAGCA GATTTATCGT 
CAGGCGCAAG GTGCATCGAC CTATAACGAA CCGGGCCGCG CTTACTATGC AGGGGTAACG 
ACCTCATTCT GA 

 

Protein sequence

MAQAADEDVM TVKATAEQEL KQQPGVSIIT AEDIKKTPPV NDLSDIIRKM PGVNLTGNSA 
TGARGNNRQI DLRGMGPENT LILIDGRPVT SRNAVRYAWD GERDTRGDTN WVPVEDVERI 
EVIRGPAAAR YGSGAAGGVV NIITKRPSNV WTGSLSLYGN QPENSKEGAT RRANINLSGP 
LAGDALTMRL YGNINKTDSD SWDINRNQNG SAAAGREGVR NKDLNTLLSW KLSPQQIVDV 
EAGYSRQGNI YTGDTQFSGG GAIPESLAKS GAETNRLYRQ NYAITHNGIW DWGQSKLGLA 
YDQTNNTRLD EGLFGRFEGS INSDRYSTSR LKNLRINSEL NIPLALWAEQ TLTLGAEWNR 
EQLNDPASSS YPGDSRDTLP GTSVNPSQRS SKNSAELSAL YFEDNIEVVP GTKVIPGLRF 
DYHDKFGGNY SPSLNIQQEL GEMFSVKAGI ARAFKAPNLY QSSTGYLLYS RGNGCPFGVD 
YDNGGGCYLA GNDNLNPEIS VNKEIGLEFK HSGWQAGVTY FRNDYKNKIV SGTDILGLTQ 
SNAAILRWEN GGKALVEGLE ANLLVPVVAD TLDWNTNATY MIESKNKDTG NPLSIIPKYT 
VNTMLDWQAT DKLSANISWT LYGKQKPRQY VTNWTEYRNG LSSREIGSYS VAGVGVNYQF 
NKNLRVNAGI SNLFDKQIYR QAQGASTYNE PGRAYYAGVT TSF