| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1819 |
|---|
| Symbol | |
|---|
| ID | 8530217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1974404 |
|---|
| End bp | 1975837 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | putrescine--2-oxoglutarate aminotransferase |
|---|
| Protein accession | YP_003259209 |
|---|
| Protein GI | 261821103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCCG TTTTCAAGGA GCGCATTTTG TCCAGATCAA ACGCCCACCT TAACCCGCTA
GAGTGTACTC AGCAGGCACT AGATTGGATT CATAGTGACA CGCTATCCCA CGATGACATA
GCGGCACTGA ATCGAGAAGT TTTGAGTTGT TTTCGTGAAT ACGTCAACCC GGGTTTTCTG
GAGTACCGAA AATCTGTCAC TACCGGCGGC GATTACGGCG CAGTCGAATG GCGCGCCAGT
GGCCCGAATA CGCTGATTGA TACCCAAGGG AATGAATACC TGGACTGCCT GGGTGGTTAC
GGCATTTTTA ACGTGGGGCA TCGTAACCCT ACTGTAATTG CTGCCGTTGA GAGCCAGCTT
GCCAGACAGC CACTGCACAG TCAGGAACTG CTTGACCCGC TGCGGGGATT GCTGGCAAAA
ACATTGGCGG CGCTAACGCC GGGCAATTTG AAATACAGCT TCTTCTGTAA TAGTGGAACG
GAATCGGTGG AAGCGGCGCT GAAGTTGGCG AAGGCCTACC AATCACCGCA TGGTAAATAT
ACCTTTATCG CCGCAACCGG TGCTTTCCAC GGCAAATCGC TAGGTGCGCT TTCTGCTACC
GCCAAACCCG CGTTTCGTCG TCCTTTCATG CCGCTGTTAC CCGGCTTCCA TCATGTTGCT
TTTGGCGATA TCAGCGCCAT GCGCAAGCAG GTTCAGCAAT GCCAGAAAAC CGGCGATGAC
GTTGCAGCCA TCATCCTTGA ACCTATTCAG GGGGAAGGCG GCGTGATTGT GCCACCGGAG
AATTATTTGC CTGCGGTCAG AGCATTATGT GATGAAATCG GGGCATTGCT GATTCTGGAT
GAGGTGCAAA CCGGCATGGG GCGCACGGGC AAGATGTTCG CCTGTGAGCA TTATGGCGTG
CAGCCTGACA TTCTGTGTTT GGCGAAGGCG CTGGGTGGCG GCGTGATGCC GATTGGCGCA
ACGGTGGCGA CGGAAGCCGT ATTCTCCGTA CTGTTTGAAA ATCCCTTCCT GCATACCACC
ACGTTCGGCG GTAACCCGCT GGCCTGTGCG GCGGCGCTGG CAACGGTCAA TGAACTGCTG
ACGAAAAATC TGCCAGAACA GGCGGCAATA CAGGGAGAAT TTTTGCTACG AGGCTTACGG
CAACTGGCGG TTGAGTACCC TCAATTGATT ATTGAAGCGC GCGGAATGGG GTTGTTACAG
GCTATCGAGT TCAGGAAAAA CGAGATCGGC TATGCCTTTG CGAAAGAGTT ATTTCAGCGC
AATATCTTAG TTGCAGGTAC TCTGAACAAC GCTAAATCGG TCAGAATTGA GCCACCGCTT
ACCATCACGC GTGCGCAGTG TGCCCGCGTG CTGGAGGAAG CAAGAGAGGT ACTTAAGAAA
CTCAGTGGCA CCCTGCCTGA TGAAAATAAA ATGAAGGAAT ATGCAGTAGA GTGA
|
|---|
| Protein sequence | MMSVFKERIL SRSNAHLNPL ECTQQALDWI HSDTLSHDDI AALNREVLSC FREYVNPGFL
EYRKSVTTGG DYGAVEWRAS GPNTLIDTQG NEYLDCLGGY GIFNVGHRNP TVIAAVESQL
ARQPLHSQEL LDPLRGLLAK TLAALTPGNL KYSFFCNSGT ESVEAALKLA KAYQSPHGKY
TFIAATGAFH GKSLGALSAT AKPAFRRPFM PLLPGFHHVA FGDISAMRKQ VQQCQKTGDD
VAAIILEPIQ GEGGVIVPPE NYLPAVRALC DEIGALLILD EVQTGMGRTG KMFACEHYGV
QPDILCLAKA LGGGVMPIGA TVATEAVFSV LFENPFLHTT TFGGNPLACA AALATVNELL
TKNLPEQAAI QGEFLLRGLR QLAVEYPQLI IEARGMGLLQ AIEFRKNEIG YAFAKELFQR
NILVAGTLNN AKSVRIEPPL TITRAQCARV LEEAREVLKK LSGTLPDENK MKEYAVE
|
|---|
| |