Gene Pecwa_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1816 
Symbol 
ID8530214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1971634 
End bp1972143 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003259206 
Protein GI261821100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGT CTGAACTCAG AATGCTGTTC AACCACTATG CAGAACGGTT AGAACGCTAT 
CTCAATCATA AACTGCGCGA CCCTCAAACA GCGGCAGATC TGGTGCAAGA GAGTTTCTTA
CGGTTGGCAC AACGGCTGGA GCAGCAGGAC GATGTAGACG ACAAGAAAGC GTATCTCTAT
AAAACAGCCA ATAATTTACT GCTCGACCAT GTCCGCCACC AACAGCGTTG GCAGATGGCA
GCGTGTGTTG ACGACGTGGA TACGACGCTG GACTCTCTGC CGGATGCTAC TCCCCAACTC
GATCGAGCAG CGATCGCTCA ACAGGAACTG GAGCGTCTGG CAAACGTATT GGCAACATTG
CCTGAACGCA CGCAGCAGAT ATTTCACCTA CACCGGTTCG AACACATGAT GCAGGTACAA
ATTGCTCAGC AGTTGGATAT TTCCCTCAGC ACCGTTGAGA AACATCTTGC TATGGCTCTG
CATGCCATGC TGACGATCCG CTCCTCGTGA
 
Protein sequence
MSESELRMLF NHYAERLERY LNHKLRDPQT AADLVQESFL RLAQRLEQQD DVDDKKAYLY 
KTANNLLLDH VRHQQRWQMA ACVDDVDTTL DSLPDATPQL DRAAIAQQEL ERLANVLATL
PERTQQIFHL HRFEHMMQVQ IAQQLDISLS TVEKHLAMAL HAMLTIRSS