Gene Pecwa_1788 details

Gene Information

• Locus tag: Pecwa_1788
• ID: 8530186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1942197
• End bp: 1942913
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 54%
• Product: ABC transporter related protein
• Protein accession: YP_003259181
• Protein GI: 261821075

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGTAG AGGTGAACGT GCAAGAAAGG GCGCAGGCAG CGGAAGCGGT GATTGAAACT 
CGCCAGCTCT ATAAACGCTT TGGTCAGGTT ACCGCGCTGG AAGATATCAA TATCCGCATC 
GCGCGCGGTG AGTTTGTCGC CATCATGGGG GCGTCCGGTT CTGGTAAAAC CACGTTGATG 
AACATTCTTA CTTGTCTGGA TACGGTCAGC GAAGGGCAGG TGCTGTTGGA CGGCGTAGAT 
GCTGCAGGGC TGGACGAGGA AGGTCGGCGA CAGTTCCGTG CTGATAAAAT TGGGCTGGTA 
TTTCAACAAT TCCATCTGAT TCCGTTTTTG ACCGCCTTGG AAAATGTGAT GCTGGCGCAG 
CATTACCACA GTGTGGTGGA TGAAGCAGCG GCACAGCGCG TACTTGAACA GGTTGGGCTG 
GCGCATCGTG TGGATCACTT ACCGAGCCAG CTTTCCGGCG GTGAGCAGCA GCGTGTCTGC 
ATCGCCCGCG CGCTGGTGAA TGAACCTCCG GTGATTTTCG CCGATGAGCC GACGGGAAAT 
CTGGACGAAG AGAATGAACG GCGGGTGTTG GATCTGCTGA AAGATCTGCA TCGGCAGGGG 
CGTACCATTG TGATGGTGAC GCACAATCCT GAATTGGGGC GGTTTGCCGA TCGTATTATC 
CGCCTGCAAC ACGGCAAGTA TTTCGGTGAA GAGGTGAATC ATCATGAAAT GGCGTAA 

 

Protein sequence

MSVEVNVQER AQAAEAVIET RQLYKRFGQV TALEDINIRI ARGEFVAIMG ASGSGKTTLM 
NILTCLDTVS EGQVLLDGVD AAGLDEEGRR QFRADKIGLV FQQFHLIPFL TALENVMLAQ 
HYHSVVDEAA AQRVLEQVGL AHRVDHLPSQ LSGGEQQRVC IARALVNEPP VIFADEPTGN 
LDEENERRVL DLLKDLHRQG RTIVMVTHNP ELGRFADRII RLQHGKYFGE EVNHHEMA