| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1779 |
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| Symbol | |
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| ID | 8530177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1927673 |
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| End bp | 1928572 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003259172 |
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| Protein GI | 261821066 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAACA ATATCGAAAC CAAGTGGCTC TATGATTTTA TCATGTTGGA AGAACACCGG
AGTTTTACGC TGGCTGCCGA GAAGCGGAAT ATCTCTCAAT CCTCATTCAG TCGGCGCATT
CAGGCGCTGG AAGCGGCCGT CGGGTTTGAT ATTTTTGACC GCAGCGCGCT GCCGTTGCAA
TTAACCGAAC AGGGCCGCGT GTTCCACGCC TATATCCGCA ATACGCTGGA CGATTTAGAG
TATCAGCTCA ATAAGTTGCA CGGTGGGGAT AATTATAAAA ATAAGATCAC CATTGCGGCA
GCGCATTCGC TGTCGGTGTT TATCATGCCG GAGTTGTTAA AAGACGTGCC AGACCCGCAA
GAAAAAATCT TCTATGTTGA ATCGATCGAT GTAGATGAAG CCGTGCTGAA TCTTAAAGAA
GGGCGCAGCG ACTTCATTTT CTCGTTTTAC AATGAGGATC TAATGGGGGA GCCTTTTATG
CACGAGAAGA TACTGGAATC CCGGCTTTAT CCTGTCTGCG CGTGCGACAG TGCAGGGAAG
CCGCTGTTTG ACGTGAGTGC TTCATCAGTG CCACTGCTCA ACTATACCGA GACAAGCTAC
ATGGGGCGTC AGGTCAGTCG TTACTTATCC AGTGTTGACG GCGATAAGTT CACGGTCAAT
TTTGTTTCTT CCATGAGCGA CTTGCTCAAG CGCATGACCA AGAAAGGTTA TGGTATTGCC
TGGTTGCCGG ACTATTCGAT TCAGGAAGAG TTGAAAAATA AAGAGTTGGC GATACTGAGT
ATGGAAAATG CGGTGATCCG CATGGGCGTT TATCTGTATC GGCTTGATGC GCGTCTGAAT
ATGGCGTCCG AGAAGTTTTG GCGCTACATG AAAGGGCTGT CATCGACGTC TGGGCTATAA
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| Protein sequence | MLNNIETKWL YDFIMLEEHR SFTLAAEKRN ISQSSFSRRI QALEAAVGFD IFDRSALPLQ
LTEQGRVFHA YIRNTLDDLE YQLNKLHGGD NYKNKITIAA AHSLSVFIMP ELLKDVPDPQ
EKIFYVESID VDEAVLNLKE GRSDFIFSFY NEDLMGEPFM HEKILESRLY PVCACDSAGK
PLFDVSASSV PLLNYTETSY MGRQVSRYLS SVDGDKFTVN FVSSMSDLLK RMTKKGYGIA
WLPDYSIQEE LKNKELAILS MENAVIRMGV YLYRLDARLN MASEKFWRYM KGLSSTSGL
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