Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1774 |
Symbol | |
ID | 8530172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1922209 |
End bp | 1923768 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003259167 |
Protein GI | 261821061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.737179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGCC TACACGTCAT CGGTATGACG CTGTTTCTGG CCTTTTTCTA CAGCCTGGTT TGGCTGGCGC TATGGACTAT CAGTTTCTAT TTAAGCAATA ACGACCAGCA GGCGGCGCTA CTGTTACCCC AAGGGCTGCG ATTGGCGTTG ATGATTTTGC TGCCGCGCAA ATACTGGCCG ACTTTGCTGC TTGCGGAAAT CTCTATACAG AGTTGGCTTA TCAGCGAGCA ACTCATGACG CGCTCGCTGC TACTGTTTTC CCCTTTTCTG AGCCTGATTC CGGCCATCAT CACGCATAAA ATCTGGCATC GCTATACGCT CTATTGGCAA CGACTGCTGC TGTTGCTGGC AGCGTTGACG CTTAACACCA TTCTGCACGG CATCGCTATC GGACCCTGGT TACCCTCGCA ACTGACGCAA ACGCTGCTGG CTACTTTTAC CGGCGGTGTC CTGCTGATTC CGTTCATCTA TCTGCTGTAC GAATACATCA AACAGCAGCA CTTGCAGACA TTGCTGGCAC AGGAGATCCC CGATCCACCA CTGCGTACCT CACTGCTAAT CTGGTGCTCG CTGTTTTTTT CTATCGGCGT TTGCCTGCAA ATGGCATTCA CGCCCGAGAT GGAACGCCTG TTGCTGATCT TCGTTTTTCT GCCCAATGTG GTGATGGCGT ATAAATTCGG CTGGCAAGGT GGCGTACTTT CCGCCGTACT CGGCAGCCTG ATGATTGCCG TCACTCGCCA GGTGAGCGGA GCTTTTGATG ACCTGCTCGA GCTAGAACTT TTTCTCTCTA CACAGGCATT GCTCGGCATT GGATTGGGGA TCGCTATCAG CCGTCAGCAA CAGTTGGCAC AGCGTCTTCA GCGCTACCGC CAGCAGTTGG AAAAGGAGCT AAAAACCCGC CACCGGCTGA TGGAACGCAT CATTCATACC GAAGAAGTCG TGCGCAAAGA TATCGCGCGT GAGCTACACG ATGATATCGG TCAAAACATC ACCGCTATTC AGATTCAGGC CATGCTGGTG AAACACAGCG CACCGGCTGA GGCAGCCCAA CATGCCGCCG GGCAAATCAG CGAGCTGTCG CGACGAATCC ATCACACCAC GCGCCAGTTA TTACGTCAAT TGCGCCCGCC AGTACTGGAT GAAATGGTGC TGGATAAAGC GCTGAACCAC CTGGCGGATG AGTTCTCCTT CGCGACTCGT GGTATCCAGT TTCAGTTGGA TTATCAGCTT CCCACGCCCC CTCATGATGA CGTGGTGATT TTCACGCTTT ACCGGCTGGT GCAGGAGTTG CTCAACAACA TCAACAAACA CGCCAGCGCC ACGCAGATTA CCGTCCGTCT CAGCCAGCAG GATGATCTGA TTACGCTCGA CGTCATTGAT GACGGCGTGG GCATCGCACA GAAAGGCAAT GCTCATTCGA CAGGCGGTGG CTTCGGTTTG CGGGGCATTG AAGAACGGGT GCAGGCACTG GGTGGCAACT GGTTAGTGCA ACCCGCCGCG CCGCGTGGCA CACACATAAT TGTTAACCTA CCCACAAAAT TTAAACAAAA AGACGACTAG
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Protein sequence | MRRLHVIGMT LFLAFFYSLV WLALWTISFY LSNNDQQAAL LLPQGLRLAL MILLPRKYWP TLLLAEISIQ SWLISEQLMT RSLLLFSPFL SLIPAIITHK IWHRYTLYWQ RLLLLLAALT LNTILHGIAI GPWLPSQLTQ TLLATFTGGV LLIPFIYLLY EYIKQQHLQT LLAQEIPDPP LRTSLLIWCS LFFSIGVCLQ MAFTPEMERL LLIFVFLPNV VMAYKFGWQG GVLSAVLGSL MIAVTRQVSG AFDDLLELEL FLSTQALLGI GLGIAISRQQ QLAQRLQRYR QQLEKELKTR HRLMERIIHT EEVVRKDIAR ELHDDIGQNI TAIQIQAMLV KHSAPAEAAQ HAAGQISELS RRIHHTTRQL LRQLRPPVLD EMVLDKALNH LADEFSFATR GIQFQLDYQL PTPPHDDVVI FTLYRLVQEL LNNINKHASA TQITVRLSQQ DDLITLDVID DGVGIAQKGN AHSTGGGFGL RGIEERVQAL GGNWLVQPAA PRGTHIIVNL PTKFKQKDD
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