Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1768 |
Symbol | lacZ |
ID | 8530166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1911720 |
End bp | 1914851 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | beta-D-galactosidase |
Protein accession | YP_003259161 |
Protein GI | 261821055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.035592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGACA CCGTTTTACC TAACCCAACA CGCCAGCACG TCACGCTGCA AGAGATCCTT GCTAGGCGTG ATTGGGAAAA TCCGGCTTGC ACAAACTATC AGAGGCTCCC TGCTCATCCT CCATTCAACA GTTGGCGTAG CATCACTGCT GCACAGCAAG ATGAGCCTTC TCAGCGCCTT CGTCGCATGA ATGGTGAATG GAAATTTAGT TATTTTACTC GTCCCGAAGC CGTACCGGAA AGCTGGCTAC GGCAGGATTT GCCTGATTCT ACTCCCATTC CGGTGCCTTC CAATTGGCAA CTACAGGGCT ATGACACGCC GATTTACACC AACGTAAAAT ACCCGATCCC CGTCAACCCG CCTTATGTTC CAAAAGATAA CCCTACAGGT TGTTATTCGC TCACTTTTAA AGTCAATCAT GACTGGCTCA ACCGCGGACA AACCCGGATT ATTTTTGATG GCGTCAATTC CGCATTTTAC CTCTGGTGTA ACGGCCACTG GGTAGGATAT TCACAGGATA GTCGTCTGCC TGCGGAGTTT GATATCGGTC CTTATCTGAC CGCCAGAGAG AATCGACTGG CGGTGATGGT GCTACGCTGG TCTGACGGAA GCTATCTGGA AGATCAGGAC ATGTGGCGTA TGAGCGGTAT TTTCCGCGAC GTCACGCTGC TACATAAACC AGCGGTTCAC CTTAGCGATA TCCAACTGAC GACCCCGCTC AGTGCAGATT TCCGCCACGG TACGTTGGAT ATTCAGGTGA GAGCAACACT CCTTGAATCT GAGGTCAAAA ACCATCGTAT TCACGCCCAA CTCTGGCGTG GTAATAAACT CATCGGCAAT GCACACCAGG CATTCGGTTA CGATATTGTC GATGAACGCG GTGCCTACCA CGACAAAGCT TCTCTCTGTA TTGATGTGCC ACAGCCGGAG CTGTGGAGTG CCGAGTTGCC ACACCTGTAT CGCGCCGTTA TCGCACTGGA AACCGTAGAA GGCGAGCTAA TCGAAGCGGA AGCTTATGAT GTTGGTTTCA GAAAAGTTGA AATCCGCAGC GGCCTACTGC TACTAAATGG CAAGCCATTA CTGATCCGTG GCGTTAACCG TCACGAGCAT CATCCACAGC ACGGACAGGT TATGGACGAA GACACGATGC TGCTCGATAT TATGCTAATG AAGCAGCATA ATTTTAACGC GGTACGCTGT TCACATTACC CAAACCACCC GCTGTGGTAT CGGCTATGCG ATCGCTACGG TTTGTATGTG GTAGATGAAG CAAACATTGA GACGCACGGC ATGCAGCCGA TGAATCGTCT GTCGGATGAC CCCGTCTGGT TGCCAGCCTA CAGTGAACGT GTATCGCGGA TGGTGCAACG CGACCGTAAT CATCCTTGCA TCATTATTTG GTCATTGGGG AATGAATCCG GCTATGGCGC AAACCATGAT GCACTTTACC AATGGATCAA ACGCCACGAT CCGACTCGCC CCGTGCATTA CGAAGGGGGC GGCGCGAATA GCCGTGCGAC CGATATTGTT TGCCCTATGT ACGCCCGTGT TGATGAAGAC CAGCCCTTCC CCAGCGTGCC TAAGTGGTCG ATCACAAAAT GGGTCAGTAT GCCGGATGAG CATCGGCCAC TCATCCTCTG TGAATACGCT CACGCGATGG GCAACAGCTT GGGGGGATTC GCCCGCTACT GGAGAGCATT CCGTCAGTAC CCTCGGTTAC AGGGCGGATT CATCTGGGAT TGGGTTGATC AATCGCTGAC CCGCCACGAT GAACAAGGCA ATGCCTACTG GGCATACGGT GGAGATTTTG GCGACATGCC TAACGATCGC CAGTTCTGTC TGGATGGCCT TCTTTTTCCC GATCGCACTC CCCACCCTAG CTTATATGAA GCTCAACGGG CACAGCAGCA TATTCAATTC GCCTGGCAGG CTGAATCCCC ATGTGAGTTA CACGTCACCA GCGAATATCT GTTTCGCCAT ACGGACAACG AGCTATTGAA CTGGAGCATT ACTCTGCACG GTGGCACGCT TGCGCAAGGT TCGCTACCGT TGGCGCTTGA CCCTCAGTCC ACTCAGATCC TGACGCTGTT GGAAGCACTT CCCATAGCCG ATCGCGCAGG GGAGTTGTGG CTCAATGTTG AAGTCGTACA GCCCAAAAAA ACTGCCTGGT CAGAAGCAAA CCATCGCTGT GCCTGGGATC AGTGGCAACT CCCTACACCG CTTCATCTAC CCGAAGTATC ATGTTCTGGG CAGAAAAAAC CACCAATTCT ACAAGCGTCC GAGACATACA TTGAAATCGT TCAGGGCGAA CAGCGCTGGC GTTTTAACCG CCAAAGCGGT TGGCTAGAAC AGTGGTGGAC AACAGATATT CCTACGCTGC TAGCTCCCTT ACAGGATCAG TTTGTTCGGG CACCGCTGGA TAATGACATC GGTATCAGTG AAGTCGATCG CATCGATCCC CACGCCTGGG CCGAGCGCTG GAAATCGGCC GGGCTTTATC AATTGCAGGC GCAGTGCGTT GCCATTCAGG CTGACCAACT CGCCGATGCC GTACACATTG TCACCGAACA TGTATTCTGC CATGCCGGGC AGATCCTGTT ACGGAGTAAA AAATGCTGGC AGATTGATGC ACATGGTGTG ATGACCGTTG ATGTCGACGT TGATGCTGCA ACTGTATTGC CGTCACTGGC CAGAGTGGGC TTGAGCTGCC AATTGGCTGA CATCACGCCT CAAGTCAGTT GGGTCGGGCT CGGGCCACAT GAAAATTACC CAGACCGGCA GCTCGCCGCA CAACACGGGC ATTGGAGCCT GCCACTAGAT GATCTTCACA CGCCCTACAT TTTCCCATCG GAGAACGGAT TACGCTGCAA CACGCGTACG CTGACATATG GAAAATGGGT TATCACCGGA AACTTCCATT TCGGGCTAAG TCGCTACGGA CTAACACAAT TGATGGCATG CACCCACCAC CATTTACTAA AAAAGGAAAA AGGCGTTTGG CTCAATCTGG ATGGCTTCCA CATGGGAATC GGTGGCGATG ATTCCTGGAG CCCCAGCGTT CATTGGGATG ATTTGCTCAC AGCAACGCAT TATCACTATC GTGTCGCTAT CAAACATCAC CAACCGTATT AA
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Protein sequence | MGDTVLPNPT RQHVTLQEIL ARRDWENPAC TNYQRLPAHP PFNSWRSITA AQQDEPSQRL RRMNGEWKFS YFTRPEAVPE SWLRQDLPDS TPIPVPSNWQ LQGYDTPIYT NVKYPIPVNP PYVPKDNPTG CYSLTFKVNH DWLNRGQTRI IFDGVNSAFY LWCNGHWVGY SQDSRLPAEF DIGPYLTARE NRLAVMVLRW SDGSYLEDQD MWRMSGIFRD VTLLHKPAVH LSDIQLTTPL SADFRHGTLD IQVRATLLES EVKNHRIHAQ LWRGNKLIGN AHQAFGYDIV DERGAYHDKA SLCIDVPQPE LWSAELPHLY RAVIALETVE GELIEAEAYD VGFRKVEIRS GLLLLNGKPL LIRGVNRHEH HPQHGQVMDE DTMLLDIMLM KQHNFNAVRC SHYPNHPLWY RLCDRYGLYV VDEANIETHG MQPMNRLSDD PVWLPAYSER VSRMVQRDRN HPCIIIWSLG NESGYGANHD ALYQWIKRHD PTRPVHYEGG GANSRATDIV CPMYARVDED QPFPSVPKWS ITKWVSMPDE HRPLILCEYA HAMGNSLGGF ARYWRAFRQY PRLQGGFIWD WVDQSLTRHD EQGNAYWAYG GDFGDMPNDR QFCLDGLLFP DRTPHPSLYE AQRAQQHIQF AWQAESPCEL HVTSEYLFRH TDNELLNWSI TLHGGTLAQG SLPLALDPQS TQILTLLEAL PIADRAGELW LNVEVVQPKK TAWSEANHRC AWDQWQLPTP LHLPEVSCSG QKKPPILQAS ETYIEIVQGE QRWRFNRQSG WLEQWWTTDI PTLLAPLQDQ FVRAPLDNDI GISEVDRIDP HAWAERWKSA GLYQLQAQCV AIQADQLADA VHIVTEHVFC HAGQILLRSK KCWQIDAHGV MTVDVDVDAA TVLPSLARVG LSCQLADITP QVSWVGLGPH ENYPDRQLAA QHGHWSLPLD DLHTPYIFPS ENGLRCNTRT LTYGKWVITG NFHFGLSRYG LTQLMACTHH HLLKKEKGVW LNLDGFHMGI GGDDSWSPSV HWDDLLTATH YHYRVAIKHH QPY
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