Gene Pecwa_1765 details

Gene Information

• Locus tag: Pecwa_1765
• ID: 8530162
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1907811
• End bp: 1908533
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 39%
• Product: HNH endonuclease
• Protein accession: YP_003259158
• Protein GI: 261821052

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.374586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCAA AAAATAGTCG TGTTTTTAAA TATGGAAATC AGCCGATAAG AAAAACTACT 
GTTGATGTAG TAAGGGAATT AGGAGGGGCG GCAACGGTAT CTGAAGTTGA TAATTATCTG 
AAAGCTAAGT TTTCAAACTA TAAAGATGAC ACTTATCTGA ATCTTATTGC TAATTCTGTT 
AATTGCAAGC GGAGCTATTG GAGTTTTAAC AAAACAGCCC GACGGTCTGA CGATGAAACT 
CATCGTCATC ATGAGTACGA TAAATTATAC AGACGTGGTG ATAGATATGA GATTTATCAG 
CCTTCTATAC ATGGCGTATG GGAGTTGTAT GAAGATATTT ACGGAAAATG GTGCTTCAGG 
GAGATTGAAA CTATTGATGA AGCGAAACGT CTCCAAGCGG AGTTCGAAAT AGAAGTAAGA 
AAGGCTTCTC AATTAACTTC TAAGGAGCGA AAACAGCATT TAGCAGTAAG TAATTTTCCG 
GAAATGAAAG AAGTTATTAC TAAAATTTTT GTTCGCAATC CGTATGTGGT GGCTGAGGTA 
TTACATAGAG CACAAGGGAA ATGTGAACTT TGCAAACGTA ATGCGCCATT TCTTCGTGGT 
AAAGATGGCA CACCATATCT TGAAGTTCAT CATTGCGTTC CACTATCTCA AGGAGGAGAG 
GATACGGTAG AAAATGCAAT TGCTGTTTGT CCAAATTGCC ATAGGCAGGC CCATTTTGGC 
TGA 

 

Protein sequence

MASKNSRVFK YGNQPIRKTT VDVVRELGGA ATVSEVDNYL KAKFSNYKDD TYLNLIANSV 
NCKRSYWSFN KTARRSDDET HRHHEYDKLY RRGDRYEIYQ PSIHGVWELY EDIYGKWCFR 
EIETIDEAKR LQAEFEIEVR KASQLTSKER KQHLAVSNFP EMKEVITKIF VRNPYVVAEV 
LHRAQGKCEL CKRNAPFLRG KDGTPYLEVH HCVPLSQGGE DTVENAIAVC PNCHRQAHFG