Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1727 |
Symbol | |
ID | 8530124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1874981 |
End bp | 1876258 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003259121 |
Protein GI | 261821015 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTTA CTGACACCAA AGTAAAAAAA GCTAAACCTC TTGAGAAAGA ATACAAGCTT ACTGACGGTT TTGGTATGCA CCTGCTTGTC CACCCGAACG GCTCTAAATA CTGGCGACTT TCCTACCGCT TTGCGCAGAA GCAAAAACTG TTAGCGTTGG GCGTTTACCC TGCCATTTCT TTGACTGACG CAAGGGAGCG TCGTGATGAA GCGCGTAAGC TGATTGCTAA TGGGATTGAT CCCGGCGCTA AGAAAAAGGC AAGTATCAGG GAACAACCAG GAGCACAGGA TGAATCCCGT TCTTTTGCTG TGATGGCTCG TGCATGGGCA GAGACCAAAA CCAAGTGCTC AGAAGACTAC AAGGTTAAGG TCTGGAGACG CATTGAAAAC TATCTTCTGC CTGATCTGGG AAAACGTGAT GTATCAGAGC TTGATACCAG TGATCTGCTA ACCCCACTCA GAAAAGTTGA AAAATTAGGC TATCTCGACA TCGCCATGCG TCTTAAGCAA TATACAACAT CGATCATGCG ATACGCCGTC CAGCAGAAGA TCATCAGTTA CAACCCCGCT TATGATTTGG CAGGCACTGT CGAAAAAGGT GAGACAGCAC ACCGCCCTTC TATCGAGATT TATGAAATCC CCGATCTCTT ACAAAAGATC GACGACTACC ATGGTCGGGG TCTTTTAACA GAATTAGCGA TCAGGCTCAC ATTATTGGTT TTTGTCAGGT CAAGTGAGTT ACGTTTCGCC AGATGGAACG AAATCGACTT CAAAAAATCT CTGTGGGTTA TCCCTGAACA ACGAAAGGAA GTTAAGGGGG TAAAATACTC TGGCCGTGGT GCAAAAATGA AGAGAAAGCA TTTTGTTCCA CTCTCCAGGC AAGCTGTGGA GATCTTAAAA GAGGTTAAGC AGATCACTTA TGGTGAAAAA GCGGGTGACG GGTTTATTTT CACCGGGTTT TACGACAGTG ATTCTGCGAT GAGTTCAGGC ACTATCAATA AAGCCCTTCA GCGCATGGGA TATGACACCA AAACCGATCT GTGTGGGCAT GGCTTTCGCA CGTTAGCCTG TAGTGCATTA ACAGAATCTG GATTATGGTC GGAAGACACG GTCGAGCTTC AAATGAGCCA TAAAGAGAAA AACACGGTTA GATCTGCTTA TACCCATAAA GTCAGCCATC TTGACCAGCG CAAACTGATG CTGCAATGGT GGGCGGATTT TCTGGATGCG AACCGCAATG GAGTAGTTAG TCCGTTTGAG TTTGCACAGA AAGGATAG
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Protein sequence | MSLTDTKVKK AKPLEKEYKL TDGFGMHLLV HPNGSKYWRL SYRFAQKQKL LALGVYPAIS LTDARERRDE ARKLIANGID PGAKKKASIR EQPGAQDESR SFAVMARAWA ETKTKCSEDY KVKVWRRIEN YLLPDLGKRD VSELDTSDLL TPLRKVEKLG YLDIAMRLKQ YTTSIMRYAV QQKIISYNPA YDLAGTVEKG ETAHRPSIEI YEIPDLLQKI DDYHGRGLLT ELAIRLTLLV FVRSSELRFA RWNEIDFKKS LWVIPEQRKE VKGVKYSGRG AKMKRKHFVP LSRQAVEILK EVKQITYGEK AGDGFIFTGF YDSDSAMSSG TINKALQRMG YDTKTDLCGH GFRTLACSAL TESGLWSEDT VELQMSHKEK NTVRSAYTHK VSHLDQRKLM LQWWADFLDA NRNGVVSPFE FAQKG
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